More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_6603 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008782  Ajs_0118  acyl-CoA dehydrogenase domain-containing protein  76.24 
 
 
386 aa  637    Acidovorax sp. JS42  Bacteria  normal  normal  0.3812 
 
 
-
 
NC_010676  Bphyt_6603  acyl-CoA dehydrogenase domain protein  100 
 
 
387 aa  808    Burkholderia phytofirmans PsJN  Bacteria  normal  0.884829  normal  0.0708806 
 
 
-
 
NC_009720  Xaut_1346  acyl-CoA dehydrogenase domain-containing protein  85.53 
 
 
387 aa  686    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6788  acyl-CoA dehydrogenase domain protein  85.01 
 
 
387 aa  698    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6654  acyl-CoA dehydrogenase domain-containing protein  90.96 
 
 
387 aa  725    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0989  acyl-CoA dehydrogenase domain-containing protein  79.33 
 
 
387 aa  662    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2142  acyl-CoA dehydrogenase domain-containing protein  82.69 
 
 
387 aa  676    Polaromonas naphthalenivorans CJ2  Bacteria  normal  decreased coverage  0.00458594 
 
 
-
 
NC_010557  BamMC406_5974  acyl-CoA dehydrogenase domain-containing protein  90.81 
 
 
385 aa  711    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0583  acyl-CoA dehydrogenase-like  82.43 
 
 
387 aa  668    Polaromonas sp. JS666  Bacteria  normal  0.530732  normal 
 
 
-
 
NC_007952  Bxe_B2584  putative acyl-CoA dehydrogenase  98.45 
 
 
387 aa  800    Burkholderia xenovorans LB400  Bacteria  normal  0.289384  normal  0.276761 
 
 
-
 
NC_007953  Bxe_C0655  putative acyl-CoA dehydrogenase  87.73 
 
 
386 aa  695    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.936999 
 
 
-
 
NC_011205  SeD_A0960  acyl-CoA dehydrogenase domain-containing protein  78.81 
 
 
387 aa  657    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0928  acyl-CoA dehydrogenase domain protein  79.33 
 
 
387 aa  662    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.327846  normal 
 
 
-
 
NC_012791  Vapar_1312  acyl-CoA dehydrogenase domain protein  86.82 
 
 
387 aa  717    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5810  acyl-CoA dehydrogenase-like  91.21 
 
 
401 aa  729    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.120503  n/a   
 
 
-
 
NC_008786  Veis_4806  acyl-CoA dehydrogenase domain-containing protein  80.05 
 
 
390 aa  654    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0972672  normal  0.132645 
 
 
-
 
NC_011992  Dtpsy_0136  acyl-CoA dehydrogenase domain protein  76.24 
 
 
386 aa  637    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1009  acyl-CoA dehydrogenase domain protein  79.33 
 
 
387 aa  662    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6270  acyl-CoA dehydrogenase domain-containing protein  91.08 
 
 
385 aa  712    Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6174  acyl-CoA dehydrogenase domain-containing protein  91.21 
 
 
401 aa  729    Burkholderia cenocepacia HI2424  Bacteria  normal  0.785501  normal 
 
 
-
 
NC_010002  Daci_0198  acyl-CoA dehydrogenase domain-containing protein  80.88 
 
 
388 aa  639    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1388  acyl-CoA dehydrogenase domain-containing protein  78.59 
 
 
389 aa  649    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3899  acyl-CoA dehydrogenase  80.74 
 
 
389 aa  631  1e-180  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00207473  normal  0.36456 
 
 
-
 
NC_010512  Bcenmc03_6853  acyl-CoA dehydrogenase domain-containing protein  77.46 
 
 
388 aa  621  1e-177  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3542  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  77.81 
 
 
389 aa  620  1e-176  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2176  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  77.78 
 
 
387 aa  615  1e-175  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.247864  normal 
 
 
-
 
NC_010501  PputW619_3046  acyl-CoA dehydrogenase domain-containing protein  77.52 
 
 
387 aa  615  1e-175  Pseudomonas putida W619  Bacteria  normal  0.0247719  normal 
 
 
-
 
NC_009656  PSPA7_4635  acyl-CoA dehydrogenase  78.33 
 
 
386 aa  613  9.999999999999999e-175  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_52900  acyl-CoA dehydrogenase  78.74 
 
 
386 aa  613  9.999999999999999e-175  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.461273  normal 
 
 
-
 
NC_007509  Bcep18194_C7297  Acyl-CoA dehydrogenase  74.02 
 
 
390 aa  610  1e-173  Burkholderia sp. 383  Bacteria  normal  0.118142  normal  0.575396 
 
 
-
 
NC_009485  BBta_6663  acyl-CoA dehydrogenase  66.58 
 
 
388 aa  569  1e-161  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.831215 
 
 
-
 
NC_011004  Rpal_1802  acyl-CoA dehydrogenase domain protein  65.46 
 
 
390 aa  560  1e-158  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.586412  n/a   
 
 
-
 
NC_007778  RPB_3935  Acyl-CoA dehydrogenase-like  66.23 
 
 
391 aa  560  1e-158  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.32455  normal 
 
 
-
 
NC_007958  RPD_3695  acyl-CoA dehydrogenase-like  65.97 
 
 
391 aa  555  1e-157  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.451593  normal 
 
 
-
 
NC_004311  BRA0799  acyl-CoA dehydrogenase family protein  65.88 
 
 
388 aa  552  1e-156  Brucella suis 1330  Bacteria  normal  0.666655  n/a   
 
 
-
 
NC_009504  BOV_A0749  acyl-CoA dehydrogenase family protein  65.88 
 
 
386 aa  554  1e-156  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4265  acyl-CoA dehydrogenase-like  65.98 
 
 
390 aa  550  1e-155  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2852  acyl-CoA dehydrogenase domain-containing protein  64.3 
 
 
382 aa  535  1e-151  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.394252  normal 
 
 
-
 
NC_007794  Saro_1221  acyl-CoA dehydrogenase-like  66.58 
 
 
389 aa  534  1e-150  Novosphingobium aromaticivorans DSM 12444  Bacteria  hitchhiker  0.0080641  n/a   
 
 
-
 
NC_010511  M446_5230  acyl-CoA dehydrogenase domain-containing protein  64.66 
 
 
384 aa  532  1e-150  Methylobacterium sp. 4-46  Bacteria  normal  0.131509  normal  0.0497047 
 
 
-
 
NC_008048  Sala_1692  acyl-CoA dehydrogenase-like protein  65.12 
 
 
387 aa  522  1e-147  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2577  acyl-CoA dehydrogenase domain-containing protein  65.35 
 
 
427 aa  521  1e-147  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2735  acyl-CoA dehydrogenase-like protein  67.63 
 
 
381 aa  519  1e-146  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5073  acyl-CoA dehydrogenase domain protein  61.76 
 
 
385 aa  514  1.0000000000000001e-145  Conexibacter woesei DSM 14684  Bacteria  normal  0.275301  normal  0.195622 
 
 
-
 
NC_009952  Dshi_1058  acyl-CoA dehydrogenase domain protein  58.68 
 
 
396 aa  456  1e-127  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2783  acyl-CoA dehydrogenase domain protein  56.54 
 
 
394 aa  440  9.999999999999999e-123  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.720925  n/a   
 
 
-
 
NC_007333  Tfu_1284  putative acyl-CoA dehydrogenase  46.82 
 
 
388 aa  370  1e-101  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2442  acyl-CoA dehydrogenase domain-containing protein  47.15 
 
 
395 aa  370  1e-101  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.830058  normal 
 
 
-
 
NC_009077  Mjls_3756  acyl-CoA dehydrogenase domain-containing protein  47.52 
 
 
404 aa  366  1e-100  Mycobacterium sp. JLS  Bacteria  normal  0.8183  normal  0.282187 
 
 
-
 
NC_008146  Mmcs_3744  acyl-CoA dehydrogenase-like protein  47.52 
 
 
404 aa  366  1e-100  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3817  acyl-CoA dehydrogenase domain-containing protein  47.52 
 
 
404 aa  366  1e-100  Mycobacterium sp. KMS  Bacteria  normal  normal  0.420794 
 
 
-
 
NC_008726  Mvan_4210  acyl-CoA dehydrogenase domain-containing protein  45.97 
 
 
399 aa  362  4e-99  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0538412  normal 
 
 
-
 
NC_010338  Caul_3576  acyl-CoA dehydrogenase domain-containing protein  46.63 
 
 
387 aa  353  4e-96  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
CP001800  Ssol_0883  acyl-CoA dehydrogenase domain protein  45.38 
 
 
389 aa  347  1e-94  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_011004  Rpal_5033  acyl-CoA dehydrogenase domain protein  46.67 
 
 
388 aa  347  2e-94  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1608  acyl-CoA dehydrogenase domain-containing protein  44.76 
 
 
388 aa  346  4e-94  Frankia sp. EAN1pec  Bacteria  normal  0.0385936  normal 
 
 
-
 
NC_007778  RPB_0216  Acyl-CoA dehydrogenase-like  46.17 
 
 
388 aa  345  5e-94  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.482345  normal 
 
 
-
 
NC_007348  Reut_B4519  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  46.39 
 
 
388 aa  345  6e-94  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_1573  acyl-CoA dehydrogenase domain-containing protein  45.15 
 
 
388 aa  341  1e-92  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0397782 
 
 
-
 
NC_007958  RPD_0612  acyl-CoA dehydrogenase-like  45.9 
 
 
388 aa  341  1e-92  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.564384  normal 
 
 
-
 
NC_013922  Nmag_3454  acyl-CoA dehydrogenase domain protein  46.29 
 
 
403 aa  340  2e-92  Natrialba magadii ATCC 43099  Archaea  normal  0.263858  n/a   
 
 
-
 
NC_010551  BamMC406_1586  acyl-CoA dehydrogenase domain-containing protein  44.9 
 
 
388 aa  337  1.9999999999999998e-91  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0698291  normal  0.518401 
 
 
-
 
NC_008390  Bamb_1567  acyl-CoA dehydrogenase domain-containing protein  44.9 
 
 
388 aa  337  1.9999999999999998e-91  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2684  acyl-CoA dehydrogenase domain-containing protein  44.91 
 
 
389 aa  335  7e-91  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1641  acyl-CoA dehydrogenase domain-containing protein  44.39 
 
 
388 aa  333  4e-90  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.426767  normal  0.179373 
 
 
-
 
NC_007509  Bcep18194_C7290  Acyl-CoA dehydrogenase  45.36 
 
 
388 aa  333  5e-90  Burkholderia sp. 383  Bacteria  normal  normal  0.882993 
 
 
-
 
NC_008060  Bcen_1188  acyl-CoA dehydrogenase-like  44.13 
 
 
388 aa  332  6e-90  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.348961  n/a   
 
 
-
 
NC_008542  Bcen2424_1668  acyl-CoA dehydrogenase domain-containing protein  44.13 
 
 
388 aa  332  6e-90  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0975176  n/a   
 
 
-
 
NC_009485  BBta_3566  putative acyl-CoA dehydrogenase  45.38 
 
 
388 aa  328  8e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A4816  Acyl-CoA dehydrogenase  44.39 
 
 
388 aa  328  9e-89  Burkholderia sp. 383  Bacteria  normal  normal  0.405129 
 
 
-
 
NC_009440  Msed_1218  acyl-CoA dehydrogenase domain-containing protein  42.97 
 
 
393 aa  327  2.0000000000000001e-88  Metallosphaera sedula DSM 5348  Archaea  normal  0.673164  normal 
 
 
-
 
NC_007511  Bcep18194_B2643  Acyl-CoA dehydrogenase  43.58 
 
 
388 aa  326  5e-88  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1197  acyl-CoA dehydrogenase domain-containing protein  44.39 
 
 
387 aa  326  5e-88  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.344889  normal 
 
 
-
 
NC_008752  Aave_0176  acyl-CoA dehydrogenase domain-containing protein  45.14 
 
 
387 aa  325  1e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.393885  normal  0.0741669 
 
 
-
 
NC_007950  Bpro_5275  acyl-CoA dehydrogenase-like  44.64 
 
 
388 aa  322  8e-87  Polaromonas sp. JS666  Bacteria  normal  0.033492  normal 
 
 
-
 
NC_010002  Daci_3675  acyl-CoA dehydrogenase domain-containing protein  46.35 
 
 
387 aa  320  3e-86  Delftia acidovorans SPH-1  Bacteria  normal  0.29817  normal  0.111107 
 
 
-
 
NC_012791  Vapar_4712  acyl-CoA dehydrogenase domain protein  44.27 
 
 
389 aa  318  1e-85  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4458  acyl-CoA dehydrogenase-like protein  44.27 
 
 
390 aa  311  9e-84  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000540968  normal  0.0304373 
 
 
-
 
NC_013922  Nmag_3134  acyl-CoA dehydrogenase domain protein  41.75 
 
 
391 aa  303  3.0000000000000004e-81  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013510  Tcur_2462  acyl-CoA dehydrogenase domain protein  40.46 
 
 
393 aa  299  5e-80  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00196391  n/a   
 
 
-
 
NC_013595  Sros_3995  putative acyl-CoA dehydrogenase  40.36 
 
 
393 aa  295  1e-78  Streptosporangium roseum DSM 43021  Bacteria  normal  0.188129  normal  0.128089 
 
 
-
 
BN001301  ANIA_06761  acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_7G06510)  41.05 
 
 
427 aa  288  8e-77  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0976683  normal  0.137881 
 
 
-
 
NC_007953  Bxe_C0852  putative acyl-CoA dehydrogenase  38.38 
 
 
390 aa  278  1e-73  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0725613 
 
 
-
 
NC_013922  Nmag_2124  acyl-CoA dehydrogenase domain protein  38.42 
 
 
388 aa  274  2.0000000000000002e-72  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_0010  acyl-CoA dehydrogenase domain protein  37.86 
 
 
388 aa  268  8.999999999999999e-71  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007950  Bpro_5284  acyl-CoA dehydrogenase-like  36.56 
 
 
388 aa  250  4e-65  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_3800  acyl-CoA dehydrogenase domain protein  33.95 
 
 
397 aa  241  2e-62  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0378428  n/a   
 
 
-
 
NC_009077  Mjls_3214  acyl-CoA dehydrogenase domain-containing protein  36.04 
 
 
383 aa  233  4.0000000000000004e-60  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2163  acyl-CoA dehydrogenase domain-containing protein  34.74 
 
 
389 aa  231  1e-59  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.820192  normal  0.287496 
 
 
-
 
NC_008726  Mvan_0341  acyl-CoA dehydrogenase domain-containing protein  35.19 
 
 
378 aa  229  7e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.600199  normal 
 
 
-
 
NC_008146  Mmcs_3203  acyl-CoA dehydrogenase-like protein  36.04 
 
 
384 aa  226  7e-58  Mycobacterium sp. MCS  Bacteria  normal  0.499599  n/a   
 
 
-
 
NC_008705  Mkms_3265  acyl-CoA dehydrogenase domain-containing protein  36.04 
 
 
384 aa  226  7e-58  Mycobacterium sp. KMS  Bacteria  normal  0.0866653  normal 
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  33.8 
 
 
379 aa  222  9.999999999999999e-57  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  35.44 
 
 
375 aa  221  9.999999999999999e-57  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_004311  BRA0447  acyl-CoA dehydrogenase  35.44 
 
 
375 aa  219  3.9999999999999997e-56  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  34.27 
 
 
379 aa  220  3.9999999999999997e-56  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  33.52 
 
 
402 aa  219  7e-56  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_011146  Gbem_3575  acyl-CoA dehydrogenase domain protein  35.66 
 
 
380 aa  215  9.999999999999999e-55  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2226  acyl-CoA dehydrogenase domain protein  38.74 
 
 
386 aa  214  1.9999999999999998e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.190658  hitchhiker  0.0000495631 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  32.39 
 
 
379 aa  214  1.9999999999999998e-54  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
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