More than 300 homologs were found in PanDaTox collection
for query gene Bamb_6270 on replicon NC_008392
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008782  Ajs_0118  acyl-CoA dehydrogenase domain-containing protein  76.9 
 
 
386 aa  641    Acidovorax sp. JS42  Bacteria  normal  normal  0.3812 
 
 
-
 
NC_009379  Pnuc_1388  acyl-CoA dehydrogenase domain-containing protein  79.53 
 
 
389 aa  652    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6654  acyl-CoA dehydrogenase domain-containing protein  91.86 
 
 
387 aa  719    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0989  acyl-CoA dehydrogenase domain-containing protein  79.79 
 
 
387 aa  656    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5974  acyl-CoA dehydrogenase domain-containing protein  99.22 
 
 
385 aa  801    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0928  acyl-CoA dehydrogenase domain protein  80.05 
 
 
387 aa  657    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.327846  normal 
 
 
-
 
NC_011094  SeSA_A1009  acyl-CoA dehydrogenase domain protein  80.05 
 
 
387 aa  657    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0198  acyl-CoA dehydrogenase domain-containing protein  82.2 
 
 
388 aa  646    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6603  acyl-CoA dehydrogenase domain protein  91.08 
 
 
387 aa  736    Burkholderia phytofirmans PsJN  Bacteria  normal  0.884829  normal  0.0708806 
 
 
-
 
NC_011205  SeD_A0960  acyl-CoA dehydrogenase domain-containing protein  79.27 
 
 
387 aa  652    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0583  acyl-CoA dehydrogenase-like  83.77 
 
 
387 aa  677    Polaromonas sp. JS666  Bacteria  normal  0.530732  normal 
 
 
-
 
NC_007952  Bxe_B2584  putative acyl-CoA dehydrogenase  90.81 
 
 
387 aa  737    Burkholderia xenovorans LB400  Bacteria  normal  0.289384  normal  0.276761 
 
 
-
 
NC_007953  Bxe_C0655  putative acyl-CoA dehydrogenase  87.96 
 
 
386 aa  689    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.936999 
 
 
-
 
NC_009720  Xaut_1346  acyl-CoA dehydrogenase domain-containing protein  84.55 
 
 
387 aa  673    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6853  acyl-CoA dehydrogenase domain-containing protein  80.84 
 
 
388 aa  638    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_5810  acyl-CoA dehydrogenase-like  92.39 
 
 
401 aa  723    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.120503  n/a   
 
 
-
 
NC_011992  Dtpsy_0136  acyl-CoA dehydrogenase domain protein  76.9 
 
 
386 aa  641    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6788  acyl-CoA dehydrogenase domain protein  85.75 
 
 
387 aa  696    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1312  acyl-CoA dehydrogenase domain protein  86.28 
 
 
387 aa  703    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6270  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
385 aa  803    Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6174  acyl-CoA dehydrogenase domain-containing protein  92.39 
 
 
401 aa  723    Burkholderia cenocepacia HI2424  Bacteria  normal  0.785501  normal 
 
 
-
 
NC_008781  Pnap_2142  acyl-CoA dehydrogenase domain-containing protein  83.51 
 
 
387 aa  681    Polaromonas naphthalenivorans CJ2  Bacteria  normal  decreased coverage  0.00458594 
 
 
-
 
NC_008786  Veis_4806  acyl-CoA dehydrogenase domain-containing protein  81.46 
 
 
390 aa  667    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0972672  normal  0.132645 
 
 
-
 
NC_007005  Psyr_2176  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  81.12 
 
 
387 aa  618  1e-176  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.247864  normal 
 
 
-
 
NC_007974  Rmet_3899  acyl-CoA dehydrogenase  79.68 
 
 
389 aa  620  1e-176  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00207473  normal  0.36456 
 
 
-
 
NC_009656  PSPA7_4635  acyl-CoA dehydrogenase  79.79 
 
 
386 aa  618  1e-176  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_52900  acyl-CoA dehydrogenase  79.79 
 
 
386 aa  618  1e-176  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.461273  normal 
 
 
-
 
NC_007509  Bcep18194_C7297  Acyl-CoA dehydrogenase  74.8 
 
 
390 aa  615  1e-175  Burkholderia sp. 383  Bacteria  normal  0.118142  normal  0.575396 
 
 
-
 
NC_010501  PputW619_3046  acyl-CoA dehydrogenase domain-containing protein  79.06 
 
 
387 aa  614  1e-175  Pseudomonas putida W619  Bacteria  normal  0.0247719  normal 
 
 
-
 
NC_007348  Reut_B3542  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  77.84 
 
 
389 aa  612  9.999999999999999e-175  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6663  acyl-CoA dehydrogenase  66.67 
 
 
388 aa  567  1e-160  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.831215 
 
 
-
 
NC_011004  Rpal_1802  acyl-CoA dehydrogenase domain protein  66.23 
 
 
390 aa  556  1e-157  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.586412  n/a   
 
 
-
 
NC_007778  RPB_3935  Acyl-CoA dehydrogenase-like  66.32 
 
 
391 aa  553  1e-156  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.32455  normal 
 
 
-
 
NC_004311  BRA0799  acyl-CoA dehydrogenase family protein  66.4 
 
 
388 aa  548  1e-155  Brucella suis 1330  Bacteria  normal  0.666655  n/a   
 
 
-
 
NC_007958  RPD_3695  acyl-CoA dehydrogenase-like  66.06 
 
 
391 aa  549  1e-155  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.451593  normal 
 
 
-
 
NC_009504  BOV_A0749  acyl-CoA dehydrogenase family protein  66.4 
 
 
386 aa  550  1e-155  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4265  acyl-CoA dehydrogenase-like  66.06 
 
 
390 aa  540  9.999999999999999e-153  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2852  acyl-CoA dehydrogenase domain-containing protein  64.57 
 
 
382 aa  536  1e-151  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.394252  normal 
 
 
-
 
NC_007794  Saro_1221  acyl-CoA dehydrogenase-like  64.6 
 
 
389 aa  525  1e-148  Novosphingobium aromaticivorans DSM 12444  Bacteria  hitchhiker  0.0080641  n/a   
 
 
-
 
NC_010511  M446_5230  acyl-CoA dehydrogenase domain-containing protein  64.83 
 
 
384 aa  527  1e-148  Methylobacterium sp. 4-46  Bacteria  normal  0.131509  normal  0.0497047 
 
 
-
 
NC_009484  Acry_2577  acyl-CoA dehydrogenase domain-containing protein  65.88 
 
 
427 aa  521  1e-147  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1692  acyl-CoA dehydrogenase-like protein  66.05 
 
 
387 aa  518  1e-146  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2735  acyl-CoA dehydrogenase-like protein  67.63 
 
 
381 aa  517  1.0000000000000001e-145  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5073  acyl-CoA dehydrogenase domain protein  61.52 
 
 
385 aa  503  1e-141  Conexibacter woesei DSM 14684  Bacteria  normal  0.275301  normal  0.195622 
 
 
-
 
NC_009952  Dshi_1058  acyl-CoA dehydrogenase domain protein  59.32 
 
 
396 aa  457  1e-127  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2783  acyl-CoA dehydrogenase domain protein  57.26 
 
 
394 aa  435  1e-121  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.720925  n/a   
 
 
-
 
NC_007333  Tfu_1284  putative acyl-CoA dehydrogenase  46.35 
 
 
388 aa  365  1e-100  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3744  acyl-CoA dehydrogenase-like protein  47.55 
 
 
404 aa  360  2e-98  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3756  acyl-CoA dehydrogenase domain-containing protein  47.55 
 
 
404 aa  360  2e-98  Mycobacterium sp. JLS  Bacteria  normal  0.8183  normal  0.282187 
 
 
-
 
NC_008705  Mkms_3817  acyl-CoA dehydrogenase domain-containing protein  47.55 
 
 
404 aa  360  2e-98  Mycobacterium sp. KMS  Bacteria  normal  normal  0.420794 
 
 
-
 
NC_009338  Mflv_2442  acyl-CoA dehydrogenase domain-containing protein  45.52 
 
 
395 aa  358  9e-98  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.830058  normal 
 
 
-
 
NC_008726  Mvan_4210  acyl-CoA dehydrogenase domain-containing protein  45.01 
 
 
399 aa  353  2e-96  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0538412  normal 
 
 
-
 
NC_010338  Caul_3576  acyl-CoA dehydrogenase domain-containing protein  44.7 
 
 
387 aa  345  1e-93  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0216  Acyl-CoA dehydrogenase-like  47.03 
 
 
388 aa  345  1e-93  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.482345  normal 
 
 
-
 
NC_013922  Nmag_3454  acyl-CoA dehydrogenase domain protein  46.94 
 
 
403 aa  344  2e-93  Natrialba magadii ATCC 43099  Archaea  normal  0.263858  n/a   
 
 
-
 
NC_011004  Rpal_5033  acyl-CoA dehydrogenase domain protein  46.51 
 
 
388 aa  342  5e-93  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4519  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  46.21 
 
 
388 aa  342  7e-93  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0883  acyl-CoA dehydrogenase domain protein  43.44 
 
 
389 aa  339  4e-92  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009921  Franean1_1608  acyl-CoA dehydrogenase domain-containing protein  43.6 
 
 
388 aa  339  5.9999999999999996e-92  Frankia sp. EAN1pec  Bacteria  normal  0.0385936  normal 
 
 
-
 
NC_010084  Bmul_1573  acyl-CoA dehydrogenase domain-containing protein  45.99 
 
 
388 aa  338  9.999999999999999e-92  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0397782 
 
 
-
 
NC_010551  BamMC406_1586  acyl-CoA dehydrogenase domain-containing protein  45.74 
 
 
388 aa  335  7.999999999999999e-91  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0698291  normal  0.518401 
 
 
-
 
NC_008390  Bamb_1567  acyl-CoA dehydrogenase domain-containing protein  45.74 
 
 
388 aa  335  1e-90  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0612  acyl-CoA dehydrogenase-like  45.48 
 
 
388 aa  334  2e-90  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.564384  normal 
 
 
-
 
NC_008060  Bcen_1188  acyl-CoA dehydrogenase-like  45.22 
 
 
388 aa  331  1e-89  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.348961  n/a   
 
 
-
 
NC_008542  Bcen2424_1668  acyl-CoA dehydrogenase domain-containing protein  45.22 
 
 
388 aa  331  1e-89  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0975176  n/a   
 
 
-
 
NC_010508  Bcenmc03_1641  acyl-CoA dehydrogenase domain-containing protein  45.22 
 
 
388 aa  330  2e-89  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.426767  normal  0.179373 
 
 
-
 
NC_009719  Plav_2684  acyl-CoA dehydrogenase domain-containing protein  43.86 
 
 
389 aa  326  5e-88  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0176  acyl-CoA dehydrogenase domain-containing protein  45.17 
 
 
387 aa  326  5e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  0.393885  normal  0.0741669 
 
 
-
 
NC_007510  Bcep18194_A4816  Acyl-CoA dehydrogenase  44.7 
 
 
388 aa  325  6e-88  Burkholderia sp. 383  Bacteria  normal  normal  0.405129 
 
 
-
 
NC_008786  Veis_1197  acyl-CoA dehydrogenase domain-containing protein  44.65 
 
 
387 aa  325  6e-88  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.344889  normal 
 
 
-
 
NC_009485  BBta_3566  putative acyl-CoA dehydrogenase  46.11 
 
 
388 aa  323  2e-87  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7290  Acyl-CoA dehydrogenase  43.86 
 
 
388 aa  323  4e-87  Burkholderia sp. 383  Bacteria  normal  normal  0.882993 
 
 
-
 
NC_009440  Msed_1218  acyl-CoA dehydrogenase domain-containing protein  42.18 
 
 
393 aa  322  5e-87  Metallosphaera sedula DSM 5348  Archaea  normal  0.673164  normal 
 
 
-
 
NC_007511  Bcep18194_B2643  Acyl-CoA dehydrogenase  43.41 
 
 
388 aa  322  5e-87  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4712  acyl-CoA dehydrogenase domain protein  46.17 
 
 
389 aa  322  9.999999999999999e-87  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3675  acyl-CoA dehydrogenase domain-containing protein  46.21 
 
 
387 aa  320  3.9999999999999996e-86  Delftia acidovorans SPH-1  Bacteria  normal  0.29817  normal  0.111107 
 
 
-
 
NC_007950  Bpro_5275  acyl-CoA dehydrogenase-like  44.73 
 
 
388 aa  318  9e-86  Polaromonas sp. JS666  Bacteria  normal  0.033492  normal 
 
 
-
 
NC_007974  Rmet_4458  acyl-CoA dehydrogenase-like protein  44.65 
 
 
390 aa  311  2e-83  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000540968  normal  0.0304373 
 
 
-
 
NC_013922  Nmag_3134  acyl-CoA dehydrogenase domain protein  42.05 
 
 
391 aa  304  1.0000000000000001e-81  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013510  Tcur_2462  acyl-CoA dehydrogenase domain protein  40 
 
 
393 aa  287  2.9999999999999996e-76  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00196391  n/a   
 
 
-
 
BN001301  ANIA_06761  acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_7G06510)  40.26 
 
 
427 aa  285  1.0000000000000001e-75  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0976683  normal  0.137881 
 
 
-
 
NC_013595  Sros_3995  putative acyl-CoA dehydrogenase  39.95 
 
 
393 aa  283  3.0000000000000004e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  0.188129  normal  0.128089 
 
 
-
 
NC_013922  Nmag_2124  acyl-CoA dehydrogenase domain protein  38.64 
 
 
388 aa  271  1e-71  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_0010  acyl-CoA dehydrogenase domain protein  38.9 
 
 
388 aa  270  2e-71  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007953  Bxe_C0852  putative acyl-CoA dehydrogenase  37.86 
 
 
390 aa  268  1e-70  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0725613 
 
 
-
 
NC_007950  Bpro_5284  acyl-CoA dehydrogenase-like  35.81 
 
 
388 aa  244  1.9999999999999999e-63  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_3800  acyl-CoA dehydrogenase domain protein  33.42 
 
 
397 aa  236  3e-61  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0378428  n/a   
 
 
-
 
NC_009675  Anae109_2163  acyl-CoA dehydrogenase domain-containing protein  34.74 
 
 
389 aa  227  2e-58  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.820192  normal  0.287496 
 
 
-
 
NC_009077  Mjls_3214  acyl-CoA dehydrogenase domain-containing protein  36.48 
 
 
383 aa  227  2e-58  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0341  acyl-CoA dehydrogenase domain-containing protein  36.18 
 
 
378 aa  225  8e-58  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.600199  normal 
 
 
-
 
NC_008146  Mmcs_3203  acyl-CoA dehydrogenase-like protein  36.48 
 
 
384 aa  221  1.9999999999999999e-56  Mycobacterium sp. MCS  Bacteria  normal  0.499599  n/a   
 
 
-
 
NC_008705  Mkms_3265  acyl-CoA dehydrogenase domain-containing protein  36.48 
 
 
384 aa  221  1.9999999999999999e-56  Mycobacterium sp. KMS  Bacteria  normal  0.0866653  normal 
 
 
-
 
NC_011146  Gbem_3575  acyl-CoA dehydrogenase domain protein  36.39 
 
 
380 aa  214  1.9999999999999998e-54  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3827  acyl-CoA dehydrogenase domain protein  34.55 
 
 
394 aa  213  5.999999999999999e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  0.893751  n/a   
 
 
-
 
NC_007953  Bxe_C0513  putative acyl-CoA dehydrogenase  35.26 
 
 
387 aa  211  2e-53  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4224  acyl-CoA dehydrogenase domain protein  32.99 
 
 
400 aa  211  2e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.0700017  normal  0.0824066 
 
 
-
 
NC_009338  Mflv_4615  acyl-CoA dehydrogenase domain-containing protein  35.92 
 
 
384 aa  210  3e-53  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0437237  normal 
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  32.96 
 
 
379 aa  210  3e-53  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  34.51 
 
 
375 aa  210  3e-53  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  33.68 
 
 
379 aa  210  4e-53  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
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