| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5284 |
|---|
| Symbol | |
|---|
| ID | 4016243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007950 |
|---|
| Strand | + |
|---|
| Start bp | 36500 |
|---|
| End bp | 37666 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637944909 |
|---|
| Product | acyl-CoA dehydrogenase-like |
|---|
| Protein accession | YP_552041 |
|---|
| Protein GI | 91791091 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCA ACCTGACCCA GGAACAGCGA ATGATCTACG AGTACGGCGA CCGTATCTCG
AAGCAGTTCG ACCACAACTA CTGGCGCGGC TACGCTGAGA AGAACGAACG GCCGACCGAG
CTGTACCAGC AGATCACCGA CGACGGCTTT CTCGGCGTCA TGGTGCCCGA GGCCTACGGC
GGAGCGGGTC AGGGCATGAC CGAGATGCTG CTGTTCATGG AGGGCCTGGC CAACAACGGC
ATTCCGCTGC TGAACCTGGT GGTCGGCCCG ACCATGACCA TGGGTCTGCT GGCCAAGCAC
GCCAGCGAGG ACATGAAGCG CCGCTTTCTG CCAGGGGGCT GCACCGGCGA AATCAAGTTC
TGCTTCGCCA TCACCGAACC GAACGCCGGC TCCAATTCGA TCGAGATCAC CAGCATCGCC
AAGTCCGACG GCAAGGGCGG CTTTCGGCTC AACGGCCAGA AGGTCTTCAT CACCGATGCC
AACTGTGCCG ACTACGCCAT GGTCGTCACC CGCACCACGG CGCGCGCCGA CGTGAAGAAG
AAAACCGAAG GCTTCACCAT TTTCATGGTC GACATGAAGA AGAAGGGCAT CAGCAAGACC
CTGATTCCGA TTGCCTTCCC GGTGCCCGAG ACGCAGTGGC AGGTGTTCTT CGACGATGTG
GAACTCACCG AAGCCGACGT GCTGGGCGAG GTCGGCAAGG GCTTCAACAT TTTGTTTGAC
ACGCTCAACC CCGAGCGCAT CATCCTGTCG GGGCTGTGCA CCGGCGTCGG CCGCTTCGCG
CTCAAGCGCG CGGTGGACTA CGCCAATGAT CGCAAGGTGT TCAACAACAC CCCCATCGGC
GCCTACCAGG GCGTGCAGCA TCCGCTGGCC ATGGCGCGCA GCGAGATCGA GATGGCCTCG
CTGATGGCGC TCAAGGCCGC CTGGGCTTTC GACCAGGGCC TGCCCGCCGG CGAATTTGCC
AACATGGCCA AGTACGCCGC CGCCGAGGCC GGCATTCACG CCGTCGACAG CGCGATCCAG
TGCTTCGGCG GCAACGGTTT CACCAAGGAA TACGGCATCT ACGACCTGTA CGGCCTGGTG
CGCCTGCTGC GCACCGCGCC ACTGAACCGT GAAATGGTGC TCAACCACAT CGCCGAGCAC
GTGATGGGCC TGCCGCGCTC GTACTAA
|
|---|
| Protein sequence | MDFNLTQEQR MIYEYGDRIS KQFDHNYWRG YAEKNERPTE LYQQITDDGF LGVMVPEAYG
GAGQGMTEML LFMEGLANNG IPLLNLVVGP TMTMGLLAKH ASEDMKRRFL PGGCTGEIKF
CFAITEPNAG SNSIEITSIA KSDGKGGFRL NGQKVFITDA NCADYAMVVT RTTARADVKK
KTEGFTIFMV DMKKKGISKT LIPIAFPVPE TQWQVFFDDV ELTEADVLGE VGKGFNILFD
TLNPERIILS GLCTGVGRFA LKRAVDYAND RKVFNNTPIG AYQGVQHPLA MARSEIEMAS
LMALKAAWAF DQGLPAGEFA NMAKYAAAEA GIHAVDSAIQ CFGGNGFTKE YGIYDLYGLV
RLLRTAPLNR EMVLNHIAEH VMGLPRSY
|
|---|
| |