| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1692 |
|---|
| Symbol | |
|---|
| ID | 4081095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1782267 |
|---|
| End bp | 1783430 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638010066 |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_616738 |
|---|
| Protein GI | 103487177 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAG CCGACCAACA AAGCCATCCC GAAATCCGCG AGGCGGTGCG CCGCCTCTGC
GCCGGTTTTC CGGGCGATTA TTGGCAACGG CTCGACCGCG AGCGCATTTA TCCGACCGAG
TTCGTGCGTA CGCTGACCGA AGCGGGTTTT CTCTCGGTGC TGATCCCCGA ACAATATGGC
GGATCGGGCC TCGGCCTCGG CGCGGCGACC GCGGTGCTCG AGGAAATCCA CCGGTCGGGC
TGCAATGGCG GCGCCTGCCA TGCGCAGATG TATACGATGG GTACCTTGCT CAAGCACGGG
TCGGAGGCGC AGAAACAGGC CTATCTGCCC GCGATCGCGC GCGGCGAGCT GCGCCTGCAG
GCCTTCGGCG TCACCGAGCC GACCGCGGGC ACTGACACCA CGCGCATCCG CACCTTCGCG
CGCAAGGTCG GCGACAAATA TGTGGTCAAT GGGCAGAAGA TCTGGATCAG CCGAGCCGAA
CATTCGGACC TGATGGTCCT GCTCTGCCGC ACAACGCCGC GCGACGAATG CGCCAAGCCG
TCGGACGGGA TGAGCGTACT GCTCGTCGAC ATGCGCGAGG CGGTGGGCAA GGGCCTCACC
ATCCGTCCTC TGCGCACGAT GCTCAACCAT GCGACGACCG AGCTCTTTTT CGACGATCTC
GAAGTTCCTG CCGCCAATTT GATCGGCGAG GAGGGCCGGG GGTTTCGCTA TATCCTGTCG
GGCATGAACG CCGAGCGTAT CCTGATCGCG TCGGAATGTA TCGGCGACGG CCGCTTCTTC
GTCGACCGCG CCACCGCATA CGCCAGGGAC CGCTCGGTCT TTGGCCGCCC GATCGGCGAA
AACCAGGGCA TCCAGTTCCC CATCGCACGC GCTTATGTCC AGATCGCCGC CGCTGCCGAG
ATGGTGGCCA AGGCGGCGCG CCTCTTCGAC GCAGGCGCCG ACTGCGGAAC CGAGGCGAAT
ATGGCGAAGA TGCTCGCGTC GGAGGCGAGC TGGTATGCCG CCGACATGTG CCTTCAGACG
CACGGCGGCT TCGGTTTTGC CGAGGAATAT GACATCGAGC GCAAGTTCCG CGAAACCCGG
CTCTATCAGG TCGCGCCGAT CAGCACGAAC CTCATCCTCA GCCATGTCGC AACGCACGCG
CTTGGCCTGC CCAAGAGCTT CTGA
|
|---|
| Protein sequence | MSEADQQSHP EIREAVRRLC AGFPGDYWQR LDRERIYPTE FVRTLTEAGF LSVLIPEQYG
GSGLGLGAAT AVLEEIHRSG CNGGACHAQM YTMGTLLKHG SEAQKQAYLP AIARGELRLQ
AFGVTEPTAG TDTTRIRTFA RKVGDKYVVN GQKIWISRAE HSDLMVLLCR TTPRDECAKP
SDGMSVLLVD MREAVGKGLT IRPLRTMLNH ATTELFFDDL EVPAANLIGE EGRGFRYILS
GMNAERILIA SECIGDGRFF VDRATAYARD RSVFGRPIGE NQGIQFPIAR AYVQIAAAAE
MVAKAARLFD AGADCGTEAN MAKMLASEAS WYAADMCLQT HGGFGFAEEY DIERKFRETR
LYQVAPISTN LILSHVATHA LGLPKSF
|
|---|
| |