| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4635 |
|---|
| Symbol | |
|---|
| ID | 5353630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 4757107 |
|---|
| End bp | 4758267 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640813682 |
|---|
| Product | acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_001349979 |
|---|
| Protein GI | 152989053 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGA ACAGCGAAGA GCTGAACGCG ATCCGCGAGG GCGTGCGTGC CCTCTGCGCC
GAATTCGACG CCGCCTACTG GCGCCGCATC GATGAGCAGC GCGGTTTTCC CGAGGCCTTC
GTCAAGGCCC TGACCGACGC CGGCTGGCTC TCGGCAATGA TCCCGGAGGA GTACGGCGGT
TCCGGCCTGG GCCTGGCCGA GGCCTCGGTG ATCCTGGAGG AGGTCAACCG CTGCGGCGGC
AACTCCGGCA CCGTGCACGG GCAGATGTAC AACATGTTCA CGTTGCTGCG TAACGGCAGC
GAGGCGCAGA AGCGCTTCTA CCTGCCGAAG CTGGCCAGCG GCGAGCTGCG CCTGCAGTCG
ATGGGGGTGA CCGAGCCGAC CACCGGTACC GACACCACCA AGATCAAGAC CACCGCCGTG
CGCAAGGGCG ACCGCTACGT GATCAACGGG CAGAAGGTGT GGATCTCGCG GATCCAGCAC
TCCGACCTGA TGATCCTGCT GGCGCGCACC ACGCCGCTGG CCGAGGTGAA GCGCAAGTCC
GAAGGCATGT CGATCTTCCT CGTCGACCTG CGCGAGGCCA TCGGCAAGGG CCTCACCGTG
CAGCCGATCG CCAACATGGT CAACCATGAG ACCAACGAGC TGTTCTTCGA CAACCTGGAG
ATTCCCGTCG ATAGCCTGAT CGGCGAGGAA GGCAAGGGCT TCCGCTACAT CCTCGACGGC
CTCAATGCCG AGCGCACGCT GATCGCCGCC GAATGCATCG GCGACGGTCG CTGGTTCATC
GACAAGGCCA GCCACTATGC CCGCGACCGC GTGGTTTTCG GCCGGCCGAT CGGGCAGAAC
CAGGGCGTGC AGTTCCCCAT CGCCGAGGCG CACATCGAGG TGGAGGCCGC CGACCTGATG
CGCTGGCGCG CCTGCCGGGA GTACGACGCC GGACTCAACG CCGGGGCCAG CGCGAACATG
GCCAAGTACC TGGCGGCGAA GGCTTCCTGG GAGGCGGCCA ACGCCTGCCT GCAGACCCAC
GGCGGCTTCG GCTTCGCCTG CGAATACGAC GTCGAGCGCA AGTTCCGCGA GACCCGCCTG
TACCAGGTGG CGCCGATCTC CACCAACCTG ATCCTGTCCT ACGTGGCCGA GCACCTGCTC
GAACTGCCGC GCTCGTTCTG A
|
|---|
| Protein sequence | MNPNSEELNA IREGVRALCA EFDAAYWRRI DEQRGFPEAF VKALTDAGWL SAMIPEEYGG
SGLGLAEASV ILEEVNRCGG NSGTVHGQMY NMFTLLRNGS EAQKRFYLPK LASGELRLQS
MGVTEPTTGT DTTKIKTTAV RKGDRYVING QKVWISRIQH SDLMILLART TPLAEVKRKS
EGMSIFLVDL REAIGKGLTV QPIANMVNHE TNELFFDNLE IPVDSLIGEE GKGFRYILDG
LNAERTLIAA ECIGDGRWFI DKASHYARDR VVFGRPIGQN QGVQFPIAEA HIEVEAADLM
RWRACREYDA GLNAGASANM AKYLAAKASW EAANACLQTH GGFGFACEYD VERKFRETRL
YQVAPISTNL ILSYVAEHLL ELPRSF
|
|---|
| |