| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1312 |
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| Symbol | |
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| ID | 7972993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1428518 |
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| End bp | 1429681 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791910 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002943229 |
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| Protein GI | 239814319 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACC ACAACGACAC CCGCTTTGCC GACATCCGCG ACGCCGTGCG CGACCTGTGC
GCGCAGTTTC CCAACGAGTA CTTCCGCAAG ATCGACGAGG CGCGCGGCTA CCCCGCCGAG
TTCGTCGACG CGCTCACCAA GGCCGGCTGG ATGGCCGCGC TCATTCCCCA GGAGTACGGC
GGCTCCGGCC TCGGGCTCAC CGAAGCCTCG GTGATCATGG AAGAGATCAA CCGCTCGGGC
GGCAATTCGG GCGCCTGCCA CGGCCAGATG TACAACATGG GCACGCTGCT GCGCCACGGC
AGCGAGGCGC AGAAGCGCAA CTACCTGCCG CGCATCGCCA CTGGCGAGCT GCGCCTGCAG
TCGATGGGCG TGACCGAGCC CAGCACCGGC ACCGACACCA CCAGGATCAA AACCACGGCC
GTGAAGAAGG GCGACCGCTA CGTCGTCAAC GGCCAGAAGG TGTGGATCTC GCGCATCCAG
CATTCGGACC TGATGATCCT GCTCGCGCGC ACCACGCCGC TTGCGGAGGT CAAGAAGAAA
TCCGAGGGCA TGTCGATCTT CATCGTCGAC CTGCGCGAAG CCATCGGCCA AGGCATGACG
GTGCGGCCCA TCCTGAACAT GGTGAACCAC GAGACCAACG AGCTGTTCTT CGAGAACCTC
GAGATCCCGG CCGAGAACCT GATCGGCGAA GAGGGCCAGG GCTTCAAGTA CATCCTCGAC
GGCCTCAATG CCGAGCGCAC GCTGATCGCG GCCGAATGCA TCGGCGACGG CTATTGGTTC
ATCGACAAGG TCACGGCCTA CACCAAGGAG CGCGTGGTGT TCGGCCGGCC CATCGGCCAG
AACCAGGGCG TGCAGTTTCC GATTGCCGAG GCCTTCATCG AGATAGAGGC CGCCAACCTC
ATGCGCTACG AGGCCTGCCG CCTGTTCGAT GCGCGCGAGC CCTGCGGCGC ACAGGCCAAC
ATGGCAAAGT ACCTGGCGGC CAAGGCCAGC TGGGAGGCGG CCAATGCCTG CCTGCAGTTC
CATGGCGGCT TCGGCTTTGC GTGCGAATAC GACATCGAGC GCAAGTTCCG CGAGACGCGG
CTCTACCAGG TGGCACCGAT CTCGACCAAC CTCATCCTGA GCTACGTGGC GGAGCACATG
CTCGGCCTGC CGCGTTCGTT CTGA
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| Protein sequence | MNNHNDTRFA DIRDAVRDLC AQFPNEYFRK IDEARGYPAE FVDALTKAGW MAALIPQEYG
GSGLGLTEAS VIMEEINRSG GNSGACHGQM YNMGTLLRHG SEAQKRNYLP RIATGELRLQ
SMGVTEPSTG TDTTRIKTTA VKKGDRYVVN GQKVWISRIQ HSDLMILLAR TTPLAEVKKK
SEGMSIFIVD LREAIGQGMT VRPILNMVNH ETNELFFENL EIPAENLIGE EGQGFKYILD
GLNAERTLIA AECIGDGYWF IDKVTAYTKE RVVFGRPIGQ NQGVQFPIAE AFIEIEAANL
MRYEACRLFD AREPCGAQAN MAKYLAAKAS WEAANACLQF HGGFGFACEY DIERKFRETR
LYQVAPISTN LILSYVAEHM LGLPRSF
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