Gene Tfu_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1284 
Symbol 
ID3581083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1490690 
End bp1491856 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content66% 
IMG OID637684981 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_289345 
Protein GI72161688 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCA GCAAAGACAC GGTGCACGAG GACATCCGCC AAGCAGTCCG GGACCTGTGC 
GCCAAATTCC CCGACGAATA CTGGATGAAG CACGACCAGT CGCAGGAATT CCCCTGGGAG
TTCTACAACG CCATCGTCGA GGCGGGCTGG TTGGGCTTGA CCGTCCCCAC CGAGTACGGC
GGCGGCGGAC TCGGCGTCAC CGAAGCCGCC ATCGTGGAAC AGGAGATCGC CGCCTCCGGC
GCGGGCATGA ACGGATGCAG CGCCGTCCAC ATCGGCATCT TCGGTTTCGA ACCGATCATC
AAGTACGGCA GCGAAGACCT CAAACAGCGT TTCCTGCCCC GCCTGGTCAG CGGTGACCTG
CACGTGTCCT TCGCCGTGAC CGAGCCCGAC GCCGGCACGG ACACCACCAA CCTCTCCACC
TTCGCCCGCA AGGTCGACGG CGGCTGGCTG GTCTCCGGCA AGAAGGTCTG GATCACCAAG
GCCCAGGAAG CCGAACGGCT CATCCTCCTG GCCCGCACCA CCCCGCGCGA CCAGGTGGCC
AAGAAGACCG ACGGGCTCAC CCTGTTCTTC GCGCCCATGG ACCGCGAACG GGTCACCGTG
CGCCCCATCC CCAAGATGGG CCGCAACGCG GTCGACACCA ACGAGCTGTT CATCGACGAC
CTGTTCGTTC CCGACGAAGA CGTCATCGGC GAAGTCGGAA AGGGCTTCAA GACCATCCTG
GCCGGGCTCA ACGCCGAGCG GGTCATCTCC GCCAACGCCG CCATCGGCAT CGGCCGCGCC
GCCCTGCGCC GGGCCACCAA CTACGCCAAG GAACGCGTCG TCTTCGGCCG TCCCATCGGC
AAGAACCAGG GCATCGCCTT CCCCCTGGCT GAAGCCCTGA TCAAACTCGA CGCCGCGGAC
CTGATGTGCC AGCAGGCCGC CTGGCTGATC GACAACGGCT ACCCCGCGGG ACGGCAAGCC
AACGCCGCCA AGTTCCTGGC TGCCGAAGCC GGATTCTTCG CCGCGGACGC GGCACTGAGC
GTGCACGGCG GCTACGGCTA CAGCAAGGAG TACCACATCG AACGGTACTT CCGGGAAGCC
CGGCTGATGC GCATCGCCCC CATCAGCCAG GAAATGGTCC TCAACTACGT GGCCGAGCAC
GTTCTGGGTC TGCCGAGGAG CTACTGA
 
Protein sequence
MDFSKDTVHE DIRQAVRDLC AKFPDEYWMK HDQSQEFPWE FYNAIVEAGW LGLTVPTEYG 
GGGLGVTEAA IVEQEIAASG AGMNGCSAVH IGIFGFEPII KYGSEDLKQR FLPRLVSGDL
HVSFAVTEPD AGTDTTNLST FARKVDGGWL VSGKKVWITK AQEAERLILL ARTTPRDQVA
KKTDGLTLFF APMDRERVTV RPIPKMGRNA VDTNELFIDD LFVPDEDVIG EVGKGFKTIL
AGLNAERVIS ANAAIGIGRA ALRRATNYAK ERVVFGRPIG KNQGIAFPLA EALIKLDAAD
LMCQQAAWLI DNGYPAGRQA NAAKFLAAEA GFFAADAALS VHGGYGYSKE YHIERYFREA
RLMRIAPISQ EMVLNYVAEH VLGLPRSY