| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1197 |
|---|
| Symbol | |
|---|
| ID | 4690469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1330805 |
|---|
| End bp | 1331968 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639848972 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_995986 |
|---|
| Protein GI | 121608179 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.344889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTTG CCCTCAGCCC CGAGCAGGAA CAGATCTGCG CCGCCATCGG GCGCGTCTGC
GCCCCCTTTG ATGCCGACTA CTGGCTGCGC CGCGACCGCG AAGGCGGTTT CCCCGAGGAC
TTCCACCGCG CGCTGGCCGA CGCGGGCTGG CTGGGCATCG CCATGCCCGA AGCCTATGGC
GGCGCGGGCC TGGGCATCGG CGAGGCCGCG CTGATGATGC ACACCATCGC CGCCACGGGC
GCGGGCCTGT CGGGGGCTTC GGCGGTGCAC ATGAACATCT TCGGCCTGCA TCCGGTGGTG
GTGTTCGGCA CCGACGCGCA AAAGGCCCGC TGGCTGCCCG CGCTGATCCA GGGGCGCGAC
AAGGCTTGCT TTGGCGTGAC CGAGCCCGAC ACCGGCCTGA ACACCTTGAA GCTCAAGACC
CGCGCCGTGC GCCAGGGCGA CCACTATCTG GTGCATGGCC AAAAGCTGTG GATCAGCACC
GCGCAGGTGG CCAACAAGAT ATTGCTGCTG GCGCGCACCA CGCCGGTGGA AGAATGCAGC
GGCACGCAGG GCCTGAGCCT GTTCTACACG GACATGGACC GCAGCACCAT GGAGGTGCGC
GAGATCGAAA AGCTCGGCCG CAAATGCGTG GACTCCAACC AGGTCTTCAT CGACGGGTTG
CGCATCCCCG AGCAAGACCT GGTGGGCCAG GAGGGCCAGG GCTTTGGCTA CATCCTGCAC
GGCCTGAACC CCGAGCGCAT CCTGATCGCC AGCGAGGCCG TGGGCCTGGG CCGCGCCGCG
CTCGCGCGCG CCACCGGCTA TGCCAGCGAG CGCGAGGTGT TTGGCCGCCC CATCGGGCAG
AACCAGGGCA TACAGCACCC GCTGGCCCAG TCCTGGATGG AGCTCGAAGC CGCCCACCTG
ATGGTGCACA AGGCCGCCTG GCTCTACGAC CAGCACCGGC CCTGCGGCGC TGAAGCCAAC
GCCGCCAAAT ACCTTGCCGC CGAAGCCTGC TACCACGCCT GCGAACGCGC CATCTTCACG
CATGGCGGCA TGGGCTACGC CAAGGAATAC CATGTCGAGC GCTACCTGCG CGAATCATGG
ATCCCGCGCC TTGCGCCGGT CAGCCCGCAA CTGATCCTGT GCTTCATCGC CGAGAAGGTG
CTGGGGCTGC CGAAGTCCTA CTGA
|
|---|
| Protein sequence | MHFALSPEQE QICAAIGRVC APFDADYWLR RDREGGFPED FHRALADAGW LGIAMPEAYG
GAGLGIGEAA LMMHTIAATG AGLSGASAVH MNIFGLHPVV VFGTDAQKAR WLPALIQGRD
KACFGVTEPD TGLNTLKLKT RAVRQGDHYL VHGQKLWIST AQVANKILLL ARTTPVEECS
GTQGLSLFYT DMDRSTMEVR EIEKLGRKCV DSNQVFIDGL RIPEQDLVGQ EGQGFGYILH
GLNPERILIA SEAVGLGRAA LARATGYASE REVFGRPIGQ NQGIQHPLAQ SWMELEAAHL
MVHKAAWLYD QHRPCGAEAN AAKYLAAEAC YHACERAIFT HGGMGYAKEY HVERYLRESW
IPRLAPVSPQ LILCFIAEKV LGLPKSY
|
|---|
| |