| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1668 |
|---|
| Symbol | |
|---|
| ID | 4449182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1853721 |
|---|
| End bp | 1854887 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639693713 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_835313 |
|---|
| Protein GI | 116689690 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0975176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCG ACCTGACCGA CGACCAGCGC GCGATCGAAA GCGCGATCGA GAAAATCTGC
GAGCGCTTCG GCGACGACTA CTGGCTCGAA CGCGATCGCA CGGGCGGATT TCCGGCCGAC
TTCCACGCGG CGCTCGCCGA GGCCGGCTGG CTCGGCATCG CGATGGACCC GGCCTACGGC
GGCGCCGGGC TCGGGATGAC CGAGGCGGCG CTGATGATGC GCACGATCAG CGCGTCGGGC
GCCGGCTTGT CCGGCGCGTC GGCCGTCCAC ATGAACATCT TCGGGCTGAA CCCGGTGCAG
GTGTTCGGCA ACGATGCGCA GAAGGCGCGC TTCCTGCCGC CCCTGATCGC CGGGCGCGAC
AAGGCGTGCT TCGCGGTGAC GGAACCCGAC GCCGGGCTCG ACACCACGCA CCTGACCACC
CAGGCGCGCC GCGACGGCGA TCACTACGTG CTGAGCGGGC GCAAGATCTG GATCTCGACC
GCGCAGGTGG CGAACAAGAT GCTGATCATC GCGCGCACGA CGCCGCTCGA CCAGGTCGCG
AAGCCGACCG ACGGGCTGAG CCTGTTCTAT ACCGACCTCG ACCGTTCACG CGTCGAGGTG
CGCGAGATCG AGAAGATGGG CCGCAAGGCG GTCGATTCGA ACATGCTCTT CATCGACAAC
CTGCGCGTGT CGCGCGACGA CCTGATCGGC AACGAAGGCG ACGGCTTCCG CTATCTGCTG
CACGGGCTGA ACCCGGAACG CATCCTGATC GCCGCGGAGG CGATCGGGCT CGGGCAGGCC
GCGCTGCGCC GCGCGACGCA GTACGCGTGC GAGCGCGTGG TGTTCGGCCG GCCGATCGGG
CAGAACCAGT CGATCCAGCA TCCGCTCGCG CAGGCGTGGA TGCAGCTCGA GGCCGCATGG
CTGATGGTGA TGAAGGCCGC GACGCGCTAC GACGCGGGTC AATCGTGCGG CGCGGAGGCG
AACGCGGCGA AATACCTCGG CGCGGAAGCC GCGTTCCAGG CCTGCCAGAC GGCGATCGCG
ACGCACGGCG GGATGGGGTA CGCGAAGGAA TATCATGTCG AGCGCTATCT GCGCGAGTGT
ATGATTCCGA GGCTCGCGCC CGTGAGTCCG CAACTGATCC TGTGCTACAT CGCGGAGAAG
GTGCTCGGGC TGCCGAAGTC GTACTGA
|
|---|
| Protein sequence | MQFDLTDDQR AIESAIEKIC ERFGDDYWLE RDRTGGFPAD FHAALAEAGW LGIAMDPAYG
GAGLGMTEAA LMMRTISASG AGLSGASAVH MNIFGLNPVQ VFGNDAQKAR FLPPLIAGRD
KACFAVTEPD AGLDTTHLTT QARRDGDHYV LSGRKIWIST AQVANKMLII ARTTPLDQVA
KPTDGLSLFY TDLDRSRVEV REIEKMGRKA VDSNMLFIDN LRVSRDDLIG NEGDGFRYLL
HGLNPERILI AAEAIGLGQA ALRRATQYAC ERVVFGRPIG QNQSIQHPLA QAWMQLEAAW
LMVMKAATRY DAGQSCGAEA NAAKYLGAEA AFQACQTAIA THGGMGYAKE YHVERYLREC
MIPRLAPVSP QLILCYIAEK VLGLPKSY
|
|---|
| |