31 homologs were found in PanDaTox collection
for query gene Pden_3756 on replicon NC_008687
Organism: Paracoccus denitrificans PD1222



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008687  Pden_3756  PBSX family phage terminase large subunit  100 
 
 		 441 aa  900    Paracoccus denitrificans PD1222  Bacteria  normal  0.893937  normal  0.0951984 
 
 
-
 
NC_009485  BBta_5804  putative phage terminase large subunit  48.13 
 
 		 428 aa  177  4e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_1746  putative phage terminase, large subunit  39.81 
 
 		 499 aa  133  7.999999999999999e-30  Pseudomonas putida GB-1  Bacteria  normal  0.628877  hitchhiker  0.00000000165176 
 
 
-
 
NC_009800  EcHS_A0309  PBSX family phage terminase large subunit  29.03 
 
 		 471 aa  117  3.9999999999999997e-25  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_007204  Psyc_1001  PBSX family phage terminase large subunit  34.02 
 
 		 421 aa  114  4.0000000000000004e-24  Psychrobacter arcticus 273-4  Bacteria  normal  1  hitchhiker  0.00252251 
 
 
-
 
NC_007614  Nmul_A1463  Phage terminase, large subunit, PBSX  35.71 
 
 		 417 aa  107  3e-22  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.8452  n/a   
 
 
-
 
NC_011369  Rleg2_1143  phage terminase, large subunit, PBSX family  33.19 
 
 		 424 aa  107  3e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_2427  terminase large subunit  33.67 
 
 		 342 aa  105  1e-21  Methylobacterium extorquens PA1  Bacteria  normal  0.484378  normal  1 
 
 
-
 
NC_010505  Mrad2831_5696  PBSX family phage terminase large subunit  31.7 
 
 		 440 aa  104  3e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A0633  phage terminase, large subunit, pbsx family  30.91 
 
 		 439 aa  102  1e-20  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  hitchhiker  0.0000041592 
 
 
-
 
NC_010002  Daci_4099  PBSX family phage terminase large subunit  32.35 
 
 		 414 aa  99.8  8e-20  Delftia acidovorans SPH-1  Bacteria  normal  1  hitchhiker  0.000000271787 
 
 
-
 
NC_007643  Rru_A2590  hypothetical protein  31.4 
 
 		 505 aa  99.4  1e-19  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_003912  CJE0577  terminase B protein, putative  26.96 
 
 		 430 aa  95.9  1e-18  Campylobacter jejuni RM1221  Bacteria  normal  1  n/a   
 
 
-
 
NC_009707  JJD26997_0324  putative terminase B protein  28.04 
 
 		 430 aa  93.6  7e-18  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  1  n/a   
 
 
-
 
NC_009707  JJD26997_1131  putative terminase B protein  28.04 
 
 		 430 aa  93.6  7e-18  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.815847  n/a   
 
 
-
 
NC_014150  Bmur_1150  phage terminase, large subunit, PBSX family  26.64 
 
 		 456 aa  85.5  0.000000000000002  Brachyspira murdochii DSM 12563  Bacteria  normal  0.467738  n/a   
 
 
-
 
NC_011004  Rpal_3056  phage terminase, large subunit, PBSX family  33.5 
 
 		 421 aa  84.3  0.000000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.345936  n/a   
 
 
-
 
NC_010002  Daci_1942  PBSX family phage terminase large subunit  31.67 
 
 		 433 aa  80.1  0.00000000000008  Delftia acidovorans SPH-1  Bacteria  normal  0.16151  hitchhiker  0.000128888 
 
 
-
 
NC_009715  CCV52592_0037  Ppx/GppA family phosphatase  31.02 
 
 		 433 aa  76.3  0.000000000001  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
-
 
NC_008783  BARBAKC583_0227  PBSX family phage terminase large subunit  31.18 
 
 		 402 aa  74.7  0.000000000003  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0654  hypothetical protein  28.83 
 
 		 472 aa  63.9  0.000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.485589  n/a   
 
 
-
 
NC_013131  Caci_2856  hypothetical protein  31.44 
 
 		 484 aa  58.5  0.0000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0701856  normal  0.015637 
 
 
-
 
NC_011779  BbuZS7_G21  phage terminase, large subunit, pbsx family protein  24.71 
 
 		 396 aa  58.2  0.0000003  Borrelia burgdorferi ZS7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_2474  PBSX family phage terminase large subunit  26.27 
 
 		 418 aa  54.3  0.000004  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_1259  phage terminase, large subunit, PBSX family  26.7 
 
 		 416 aa  51.6  0.00003  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.230021  n/a   
 
 
-
 
NC_010644  Emin_0848  PBSX family phage terminase large subunit  25.43 
 
 		 397 aa  47.4  0.0005  Elusimicrobium minutum Pei191  Bacteria  normal  1  hitchhiker  0.00062306 
 
 
-
 
NC_013517  Sterm_0853  hypothetical protein  27.49 
 
 		 499 aa  45.4  0.002  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0642356  n/a   
 
 
-
 
NC_009632  SaurJH1_0905  PBSX family phage terminase large subunit  24.78 
 
 		 431 aa  44.3  0.005  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0835429  n/a   
 
 
-
 
NC_009487  SaurJH9_0887  PBSX family phage terminase large subunit  24.78 
 
 		 431 aa  44.3  0.005  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00102224  n/a   
 
 
-
 
NC_013517  Sterm_1426  phage terminase, large subunit, PBSX family  26.51 
 
 		 430 aa  43.9  0.005  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_3879  hypothetical protein  20.24 
 
 		 471 aa  43.5  0.007  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.591729  normal  0.0947318 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>