Gene Sterm_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1259 
Symbol 
ID8596737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1359942 
End bp1361192 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content33% 
IMG OID 
Productphage terminase, large subunit, PBSX family 
Protein accessionYP_003308057 
Protein GI269119880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.230021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTCA AATTAAGTCA GGTAGTAGGA AAAGGATATA AAACTTTTTG GGAAAGCAAG 
AAAAGATACA GAGTATTAAA AGGAAGCAGA GGAAGTAAGA AAAGTAAAAC AACAGCACTG
TGGATAATTT ACAATATGAT GAAACATAAA GAATCTAATA CCTTAGTTAT AAGAAAAGTT
TTTAATTCAC TAAGAGACAG CTGCTATTCA GATCTTTTAT GGGCTATTGA AAGACTGGGA
GTCAGTCATT TATGGAAATC CACAAAAAGT CCGCTTGAAT TAGTATACAA ACCTACGGGA
CAGAAAATAT TATTTCGTGG TTTGGATGAT CCGTTAAAGC TTACATCAAT CACAGTAGAA
AAAGGTTACT TATGCTGGGT ATGGATTGAG GAAGCTTATG AACTCATGAG TGAAGATGCT
TTTAATAAAC TTGATTTGTC AATCAGAGGG AAATTACCTG AACATCTATG GAAACAAATT
ACTTTCACAT TTAACCCGTG GAATGAAAAA CACTGGTTGA AAGCAAGATT TTTTGATGTG
GAAGATGAGG ATATACTGGC ACTTACTACA ACTTATAAAA TAAATGAATT TCTCGATGAT
GATGACAGAA AAGTATTTGA AAAAATGAAA AGAGACAACC CGAAAAGATA CAGGGTAGAA
GGTGAAGCAG AATGGGGAAT AGCAGAAGGT CTCATATTTG AAAACTGGGA AGAGAAAGAA
TTTGACTACA GGGAAATATC TAAAAGAAAA GGAGTAGTCT CAAGATTCGG ACTTGACTTC
GGATATACGA ATGATCCTTC CGCTTTTACA GGTTATCTTG AAGATGAAAA AAATAAAGAA
ATATATGTAT TTGATGAATT CTATAAATCC GGAATGCTGA ATGACGAGAT AGCAAACCAG
ATTAAATACA TGGGGTATGC AAAAGAGGAA ATAATAGGAG ATTCATCAGA ACAAAAAAGT
ATAGAAGAAA TAAAAAGATA CGGAATAAGA CGGATAAGAC CATCAGTTAA AGGAAAAGAC
AGCGTACTTC ACGGAATACA GTTATTACAG CAATATAAGA TATACATCCA TCCGAAGTGT
GTAAATACTA TAACAGAATT TTCAAGTTAT ATATGGGATA CAAAGGATAA TAAAGCACTA
AATAAGCCTG TGGATGCTTT TAATCACATA ATAGATGCAA TGAGATATGC AATATATAAA
CAGCCTAAAA AAGGAATAGA TGTTGAAAGA TTACTAAAGA GAGGAAGATA A
 
Protein sequence
MQVKLSQVVG KGYKTFWESK KRYRVLKGSR GSKKSKTTAL WIIYNMMKHK ESNTLVIRKV 
FNSLRDSCYS DLLWAIERLG VSHLWKSTKS PLELVYKPTG QKILFRGLDD PLKLTSITVE
KGYLCWVWIE EAYELMSEDA FNKLDLSIRG KLPEHLWKQI TFTFNPWNEK HWLKARFFDV
EDEDILALTT TYKINEFLDD DDRKVFEKMK RDNPKRYRVE GEAEWGIAEG LIFENWEEKE
FDYREISKRK GVVSRFGLDF GYTNDPSAFT GYLEDEKNKE IYVFDEFYKS GMLNDEIANQ
IKYMGYAKEE IIGDSSEQKS IEEIKRYGIR RIRPSVKGKD SVLHGIQLLQ QYKIYIHPKC
VNTITEFSSY IWDTKDNKAL NKPVDAFNHI IDAMRYAIYK QPKKGIDVER LLKRGR