| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3879 |
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| Symbol | |
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| ID | 8360052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4835528 |
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| End bp | 4836943 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966053 |
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| Product | hypothetical protein |
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| Protein accession | YP_003123542 |
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| Protein GI | 256422889 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1783] Phage terminase large subunit |
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| TIGRFAM ID | [TIGR01547] phage terminase, large subunit, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.591729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0947318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGAATG ATTTACTCCA TATCCCAAGA ATAGATATAC TGGTCGAACT CTTCAAAAGG
AGGAGGTTCG ACCCTTTTGT TATTAAGGAT GGTAAAAAAC ACCTGAAGCA GGAGCAGTCT
CTTTTCATTT TGACCGACAA AGAAACAAAG GAGTTTGCCT ACGGAGGTGC TGCAGGTGGT
GCTAAATCGT GGACTGGTTG TGTATGGTTG GTAATGGCCT GTTTGGCTTA TCCTGGTACC
AGGTGGTTCA TAGGCAGGGA AGAGCTAAAG CGTTTGAGGG CATCCACCTA TCAGACCTTT
CTGAAGGTAT GTAAGGCTTA CGGGGTGAAC AAAGATAATC ACTGGGACTA TAACGGTCAG
GATCACTTCA TCCAGTTTCA TAATGGGAGT AGGATAGATA TGCTGGACCT GAAGTTTGTG
CCGCGTGACC CTTACTACGA GCGGTATGGT TCGGTAGAGT ACACCGGCGG ATGGATCGAA
GAGGGCGGAG AGGTGAATTT CGGGGCATAC GATACGCTAA AGTCCAGGGT GGGTCGTCAT
CTGAATGATA AGTATGGATT GCTGGGTCGG ATATTCGTTA CACTTAACCC GAAGAAGAAC
TGGTGTCACA CTGTATTCTG GAAGCCATTT AAGGCGGGGC AGCTGCCGGA CAAGGTGAAG
TTCCTCCAGG CTTTGGTACA GGATAATCCG TTCATCGATC CTGGCTACAT AGATAATCTC
ATGTCAATCA CTGATAAGGT GAAGAAGCAG AGGTTGCTGT ATGGAAACTT TGACTATGAT
GATGATGATA ATGCACTGAT GGAATATGAC TCAATTAATG ACATATTCAC CAATGAGTTT
GTTGTTGAGG GTAAGAAGTA CATCACAGCT GATATAGCTC GCTTCGGTAG TGATAAATCG
GTGGTAATGG TGTGGAACGG CCTTCGTGTA GTTGAGATTC GGAAGTTTGA GAAGATGCGG
ACCACTAAGG TCGCTGACGA GATTGAGAAG ATACGGAATA AGTACGGCAT ACCTCTATCT
CATGTTGTTG TGGATGAAGA TGGCGTCGGG GGCGGTGTGG TAGACAAACT GGATGGCTGT
CATGGGTTCG TTAATAACAG TGCTCCGATT GATAATCCAC AGGATCAGCA ACAACAGAAT
TATAAGAACC TGAAGAGTCA GTGTTACTAC ATGCTGGCAG AGAGGATAAA CGATCATAAA
ATATTCGTCC GCTGTGATGA CTATGAAATG CGAGAGCTCC TATCAGAGGA GTTGGAACAG
GTGAAGAAGT GGGACGCTGA TAACGATAAA AAGCTGGAGG TTATGCCAAA GAAAGTGGTG
AAAGAGCTGC TGGGCAGGTC ACCGGACTAT TCTGATACAT TGATGATGCG GATGTTTTTT
GAGCTTAAAC CAGAGCAAAG GTGGCAAATA TTCTAA
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| Protein sequence | MANDLLHIPR IDILVELFKR RRFDPFVIKD GKKHLKQEQS LFILTDKETK EFAYGGAAGG
AKSWTGCVWL VMACLAYPGT RWFIGREELK RLRASTYQTF LKVCKAYGVN KDNHWDYNGQ
DHFIQFHNGS RIDMLDLKFV PRDPYYERYG SVEYTGGWIE EGGEVNFGAY DTLKSRVGRH
LNDKYGLLGR IFVTLNPKKN WCHTVFWKPF KAGQLPDKVK FLQALVQDNP FIDPGYIDNL
MSITDKVKKQ RLLYGNFDYD DDDNALMEYD SINDIFTNEF VVEGKKYITA DIARFGSDKS
VVMVWNGLRV VEIRKFEKMR TTKVADEIEK IRNKYGIPLS HVVVDEDGVG GGVVDKLDGC
HGFVNNSAPI DNPQDQQQQN YKNLKSQCYY MLAERINDHK IFVRCDDYEM RELLSEELEQ
VKKWDADNDK KLEVMPKKVV KELLGRSPDY SDTLMMRMFF ELKPEQRWQI F
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