25 homologs were found in PanDaTox collection
for query gene Psyc_1001 on replicon NC_007204
Organism: Psychrobacter arcticus 273-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007204  Psyc_1001  PBSX family phage terminase large subunit  100 
 
 
421 aa  871    Psychrobacter arcticus 273-4  Bacteria  normal  hitchhiker  0.00252251 
 
 
-
 
NC_010002  Daci_4099  PBSX family phage terminase large subunit  61.12 
 
 
414 aa  520  1e-146  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.000000271787 
 
 
-
 
NC_011094  SeSA_A0633  phage terminase, large subunit, pbsx family  57.08 
 
 
439 aa  464  1e-129  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.0000041592 
 
 
-
 
NC_011004  Rpal_3056  phage terminase, large subunit, PBSX family  59.09 
 
 
421 aa  245  9.999999999999999e-64  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.345936  n/a   
 
 
-
 
NC_010002  Daci_1942  PBSX family phage terminase large subunit  46.15 
 
 
433 aa  216  5e-55  Delftia acidovorans SPH-1  Bacteria  normal  0.16151  hitchhiker  0.000128888 
 
 
-
 
NC_008783  BARBAKC583_0227  PBSX family phage terminase large subunit  51.87 
 
 
402 aa  191  2.9999999999999997e-47  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2427  terminase large subunit  39.01 
 
 
342 aa  139  8.999999999999999e-32  Methylobacterium extorquens PA1  Bacteria  normal  0.484378  normal 
 
 
-
 
NC_007614  Nmul_A1463  Phage terminase, large subunit, PBSX  28.5 
 
 
417 aa  129  1.0000000000000001e-28  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.8452  n/a   
 
 
-
 
NC_010505  Mrad2831_5696  PBSX family phage terminase large subunit  36.68 
 
 
440 aa  127  3e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1259  phage terminase, large subunit, PBSX family  32.12 
 
 
416 aa  125  1e-27  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.230021  n/a   
 
 
-
 
NC_013517  Sterm_1426  phage terminase, large subunit, PBSX family  30.25 
 
 
430 aa  123  6e-27  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1143  phage terminase, large subunit, PBSX family  32.64 
 
 
424 aa  123  7e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0309  PBSX family phage terminase large subunit  33.04 
 
 
471 aa  116  6e-25  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2947  PBSX family phage terminase large subunit  28.16 
 
 
434 aa  110  3e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5804  putative phage terminase large subunit  33.03 
 
 
428 aa  107  3e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3756  PBSX family phage terminase large subunit  34.02 
 
 
441 aa  101  2e-20  Paracoccus denitrificans PD1222  Bacteria  normal  0.893937  normal  0.0951984 
 
 
-
 
NC_009012  Cthe_2474  PBSX family phage terminase large subunit  26.9 
 
 
418 aa  89.7  1e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0905  PBSX family phage terminase large subunit  25.94 
 
 
431 aa  87  5e-16  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0835429  n/a   
 
 
-
 
NC_009487  SaurJH9_0887  PBSX family phage terminase large subunit  25.94 
 
 
431 aa  87  5e-16  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00102224  n/a   
 
 
-
 
NC_014150  Bmur_1150  phage terminase, large subunit, PBSX family  24.77 
 
 
456 aa  77.4  0.0000000000005  Brachyspira murdochii DSM 12563  Bacteria  normal  0.467738  n/a   
 
 
-
 
NC_010644  Emin_0848  PBSX family phage terminase large subunit  25.49 
 
 
397 aa  76.6  0.0000000000007  Elusimicrobium minutum Pei191  Bacteria  normal  hitchhiker  0.00062306 
 
 
-
 
NC_009513  Lreu_0833  PBSX family phage terminase large subunit  32.91 
 
 
431 aa  66.6  0.0000000009  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2622  phage terminase, large subunit, PBSX family  25.06 
 
 
559 aa  62.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000146822 
 
 
-
 
NC_013170  Ccur_02810  phage terminase, large subunit, PBSX family  34.58 
 
 
426 aa  52  0.00002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.965454  hitchhiker  3.50115e-26 
 
 
-
 
NC_011779  BbuZS7_G21  phage terminase, large subunit, pbsx family protein  26.49 
 
 
396 aa  51.2  0.00003  Borrelia burgdorferi ZS7  Bacteria  normal  n/a   
 
 
-
 
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