| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3056 |
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| Symbol | |
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| ID | 6410727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3301883 |
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| End bp | 3303148 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712936 |
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| Product | phage terminase, large subunit, PBSX family |
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| Protein accession | YP_001992037 |
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| Protein GI | 192291432 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1783] Phage terminase large subunit |
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| TIGRFAM ID | [TIGR01547] phage terminase, large subunit, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.345936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCGCG GCGCCTGGGG CGGGCGTGGC TCGGGTAAAA CCCGCACGTT CGCCAAGATG
TCGGCTGTGC GTGGGATCGA CTTCGCGCAG GCCGGCATGG ATGGCGTGAT TGTCTGCGGC
CGCGAGTTCA TGAACTCGCT CGCTGACAGC TCGTTCGCGG AGGTGAAAGC GGCGATCCTC
TCGACGCCGT GGCTCGCAGA GCGTTACGAC GTCGGCGACA CGTACATTCG GACGAAATGT
AGGCGGATCA TCTTCGTTTT CGTCGGATTG CGGCACAATC TAGACAGCAT CAAGTCAAAA
GCGCGCATTC GGCTGCTGTG GGTCGATGAG GCGGAGCCGG TCTCCGATGA AGCTTGGAAC
ATCACAATCC CGACCGTGCG CGAAGAAGGG TCGGAAATCT GGCTGACCTG GAATCCGGAC
CGGAAGGCGA GCGCGACCAA CAAGCGCTTT CGCGAAAACC CGCCGGCTGG CGCGAAAATC
GTTGAGTTGA ATTGGCGGGA TAACCCCTAT TTCCCGGAGA TCCTGAATCG CACGCGGCTC
GACGACAAGG CGAACCGGCC CGACCAATAC GGTTGGGTGT GGGAGGGCGA GTATCGCTCC
GTGGTGGCCG GCGCCTATTA CGCGAAGGCA CTGACGCAGG CGAAAGAGCA GGGGCGGATT
ACGTTCGTCC CCCTCGATCC GCTCATGCAG GTGCGCGCCT ATCTCGATAT CGGCGGTGCC
GGCGCCAAGG CGGACGCCGC GGCGATCTGG ATTGTTCAAT TCGTCGGCCA GCGGATCAAC
GTCCTCGACT ACTACGAGGC GCAGGGCCAG CCGCTCGCGA CGCACGTTGC GTGGATGCGG
GAACGCGGCT GGGGCAAGGC GCTGGTCGTT CTGCCGCACG ACGGCGCGCA GACCGACAAG
GTGCACGCCA CGTCCTACGA AAGCGCGCTG CGTGAAGCCG GGTTCGATGT GATCGTGATC
CCGAACCAGG GCGCCGGCGC CGCCGCCGCG CGGATCGAAA CGGCTCGCCG GCACTTCCCG
CGGGTCTGGT TCAACGCCGA AACGACGGAA GCGGGGCGCG ACGCGCTCGG CTGGTACCAC
GAAAAGCGAT CGAACGATGA TCGCAACATC GGCCTCGGCC CAAACCACGA TTGGAGTTCT
CACGGCTCCG ACGGCTTCGG CCTGATGGCA ATCCACTACG ACCAACCCAA CGGGGCGCCG
CCGCCGCGGC AACCGTACAG CGGGCGGCGC AACTCAGGCG GCGGCGGATC GTGGATGGCG
GCATGA
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| Protein sequence | MYRGAWGGRG SGKTRTFAKM SAVRGIDFAQ AGMDGVIVCG REFMNSLADS SFAEVKAAIL
STPWLAERYD VGDTYIRTKC RRIIFVFVGL RHNLDSIKSK ARIRLLWVDE AEPVSDEAWN
ITIPTVREEG SEIWLTWNPD RKASATNKRF RENPPAGAKI VELNWRDNPY FPEILNRTRL
DDKANRPDQY GWVWEGEYRS VVAGAYYAKA LTQAKEQGRI TFVPLDPLMQ VRAYLDIGGA
GAKADAAAIW IVQFVGQRIN VLDYYEAQGQ PLATHVAWMR ERGWGKALVV LPHDGAQTDK
VHATSYESAL REAGFDVIVI PNQGAGAAAA RIETARRHFP RVWFNAETTE AGRDALGWYH
EKRSNDDRNI GLGPNHDWSS HGSDGFGLMA IHYDQPNGAP PPRQPYSGRR NSGGGGSWMA
A
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