23 homologs were found in PanDaTox collection
for query gene Rpal_3056 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011004  Rpal_3056  phage terminase, large subunit, PBSX family  100 
 
 		 421 aa  864    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.345936  n/a   
 
 
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NC_010002  Daci_1942  PBSX family phage terminase large subunit  57.74 
 
 		 433 aa  497  1e-139  Delftia acidovorans SPH-1  Bacteria  normal  0.16151  hitchhiker  0.000128888 
 
 
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NC_008783  BARBAKC583_0227  PBSX family phage terminase large subunit  55.31 
 
 		 402 aa  458  9.999999999999999e-129  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
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NC_009485  BBta_5804  putative phage terminase large subunit  46.34 
 
 		 428 aa  349  4e-95  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
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NC_010002  Daci_4099  PBSX family phage terminase large subunit  57.82 
 
 		 414 aa  251  1e-65  Delftia acidovorans SPH-1  Bacteria  normal  1  hitchhiker  0.000000271787 
 
 
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NC_011094  SeSA_A0633  phage terminase, large subunit, pbsx family  51.42 
 
 		 439 aa  248  2e-64  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  hitchhiker  0.0000041592 
 
 
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NC_007204  Psyc_1001  PBSX family phage terminase large subunit  59.09 
 
 		 421 aa  246  8e-64  Psychrobacter arcticus 273-4  Bacteria  normal  1  hitchhiker  0.00252251 
 
 
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NC_007614  Nmul_A1463  Phage terminase, large subunit, PBSX  37.03 
 
 		 417 aa  243  5e-63  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.8452  n/a   
 
 
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NC_010505  Mrad2831_5696  PBSX family phage terminase large subunit  35.58 
 
 		 440 aa  242  1e-62  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
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NC_010172  Mext_2427  terminase large subunit  36.71 
 
 		 342 aa  206  4e-52  Methylobacterium extorquens PA1  Bacteria  normal  0.484378  normal  1 
 
 
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NC_011369  Rleg2_1143  phage terminase, large subunit, PBSX family  31.7 
 
 		 424 aa  162  1e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009800  EcHS_A0309  PBSX family phage terminase large subunit  36.22 
 
 		 471 aa  125  2e-27  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_014150  Bmur_1150  phage terminase, large subunit, PBSX family  25.57 
 
 		 456 aa  90.9  4e-17  Brachyspira murdochii DSM 12563  Bacteria  normal  0.467738  n/a   
 
 
-
 
NC_011883  Ddes_0719  hypothetical protein  29.69 
 
 		 461 aa  83.6  0.000000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A2354  hypothetical protein  26.23 
 
 		 490 aa  79.3  0.0000000000001  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
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NC_010159  YpAngola_A2189  hypothetical protein  28.92 
 
 		 324 aa  78.2  0.0000000000003  Yersinia pestis Angola  Bacteria  normal  1  normal  0.580181 
 
 
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NC_008687  Pden_3756  PBSX family phage terminase large subunit  33.5 
 
 		 441 aa  76.3  0.0000000000009  Paracoccus denitrificans PD1222  Bacteria  normal  0.893937  normal  0.0951984 
 
 
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NC_012918  GM21_1003  putative DNA packaging protein GP17 (terminase)  26.34 
 
 		 504 aa  73.2  0.000000000009  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
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NC_008752  Aave_1699  putative terminase large subunit protein  27.88 
 
 		 539 aa  72.4  0.00000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.140873  normal  0.0380156 
 
 
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NC_011779  BbuZS7_G21  phage terminase, large subunit, pbsx family protein  29.65 
 
 		 396 aa  64.3  0.000000004  Borrelia burgdorferi ZS7  Bacteria  normal  1  n/a   
 
 
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NC_010655  Amuc_0386  hypothetical protein  28.79 
 
 		 543 aa  61.6  0.00000003  Akkermansia muciniphila ATCC BAA-835  Bacteria  decreased coverage  0.00110205  normal  1 
 
 
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NC_011369  Rleg2_0726  putative terminase large subunit protein  25.99 
 
 		 523 aa  60.5  0.00000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.964001  normal  1 
 
 
-
 
NC_008752  Aave_2353  putative terminase large subunit protein  28.27 
 
 		 527 aa  57.4  0.0000004  Acidovorax citrulli AAC00-1  Bacteria  normal  0.158978  unclonable  0.0000000253606 
 
 
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