Gene SeSA_A0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0633 
Symbol 
ID6515855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp621067 
End bp622386 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content50% 
IMG OID642745777 
Productphage terminase, large subunit, pbsx family 
Protein accessionYP_002113600 
Protein GI194735659 
COG category[R] General function prediction only 
COG ID[COG1783] Phage terminase large subunit 
TIGRFAM ID[TIGR01547] phage terminase, large subunit, PBSX family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000041592 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAGCC AAGTTGACCT CCAGATACCT GCCAAGTTAG TTCCTGTATT CGCGACAGAA 
GGAGTCCGTT ATCGTGGTGC TCACGGTGGA CGTGGATCTG CTAAGACGCG TACTTTTGCA
CTAATGACTG CCGTCAAAGC GTATCAAGCG GCAGAAGCCA ATATCAGTGG AGTTATCCTG
TGCGCTCGAG AATACATGAA CTCGCTGGAA GAATCCTCCA TGGAGGAGGT AAAGCAGGCA
ATTCGCTCCG TGGCGTGGCT TGACGATTAC TTCGACATTG GAGAGAAATA CATCAGGACA
AAGAACCGCA AGGTCAGCTA TGTATTCTGC GGTCTTCGCC ATAACCTAGA CAGCATCAAA
TCAAAAGCGC GAATTCTTGT AGCCTGGGTT GACGAGGCCG AGTCTGTTTC TTCGACTGCG
TGGAAAAAGC TTCGCCCGAC CGTTCGTGAA GAAGGCTCAG AAATCTGGGT TACGTGGAAC
CCGGAGAAGG ACGGCAGCGC CACCGACAAA CTTTTCAGAA AGAATCCCCC AAAAAGCTCA
ATTATTGTCG AGATGAACTA TGTTGACAAT CCATGGTTCC CCGCGGTGCT TGAGGAAGAG
CGACAGGAAG ACCTGGCAAA CCTTGATTAC GCAGATTACG CGTGGATATG GGAGGGGGCT
TACCTCGAAA ACTCAGATAA GCAGGTGCTG GCTAACAAAT ATGTCGTGCA GAGCTTCGAA
GACAATCTAT GGAGGAAATC AGAGCGCTTG CTGTTCGGTG CTGACTTCGG ATTCGCGAAA
GACCCCAGCA CGCTTATTCG CATGTTCATT CTGGATAACA ACCTCTACAT CGAATACGAG
GCCTACGGCA ATGGCGTAGA GCTCGACGAT ATGTGGAAGT TTTATGCAGG CAAAACCGAT
GCCACGCCGA AACAGCTTGA GGACTGGGAG GTCACTGACG ATGCGAAATT CCCCGGTATC
CCTGAAGCGC GTAAATGGCC CATCAAAGCC GACAACTCCA GGCCAGAAAC TATCAGCCAT
ATCAAAGGGC AGGGATTCAA CATCTCAGCT GCTCAGAAAT GGCAGGGTAG CGTAGAGGAC
GGCATCACTT TCCTACGTGG ATTTAAGAAG ATCATCATCC ATCCTCGCTG CAAAGAAACA
GCGAAAGAGG CGCGGCTTTA CTCGTACAAA ACAGACCGTA TCACTGGCGA AGTCTTGCCG
ATTATCGAGG ATAAGTACAA CCACTGCTGG GATGGAATCC GATACGGTCT GGACGGGTAT
ATCAAACGCA AACCTCAATC GATGGGGATG ATGATTCCTA AGCGCCTTAG GGGGAAATAA
 
Protein sequence
MESQVDLQIP AKLVPVFATE GVRYRGAHGG RGSAKTRTFA LMTAVKAYQA AEANISGVIL 
CAREYMNSLE ESSMEEVKQA IRSVAWLDDY FDIGEKYIRT KNRKVSYVFC GLRHNLDSIK
SKARILVAWV DEAESVSSTA WKKLRPTVRE EGSEIWVTWN PEKDGSATDK LFRKNPPKSS
IIVEMNYVDN PWFPAVLEEE RQEDLANLDY ADYAWIWEGA YLENSDKQVL ANKYVVQSFE
DNLWRKSERL LFGADFGFAK DPSTLIRMFI LDNNLYIEYE AYGNGVELDD MWKFYAGKTD
ATPKQLEDWE VTDDAKFPGI PEARKWPIKA DNSRPETISH IKGQGFNISA AQKWQGSVED
GITFLRGFKK IIIHPRCKET AKEARLYSYK TDRITGEVLP IIEDKYNHCW DGIRYGLDGY
IKRKPQSMGM MIPKRLRGK