16 homologs were found in PanDaTox collection
for query gene Cthe_2474 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009012  Cthe_2474  PBSX family phage terminase large subunit  100 
 
 
418 aa  859    Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_02810  phage terminase, large subunit, PBSX family  39.86 
 
 
426 aa  301  1e-80  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.965454  hitchhiker  3.50115e-26 
 
 
-
 
NC_013204  Elen_2622  phage terminase, large subunit, PBSX family  40.69 
 
 
559 aa  301  2e-80  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000146822 
 
 
-
 
NC_013517  Sterm_1426  phage terminase, large subunit, PBSX family  41.25 
 
 
430 aa  245  9.999999999999999e-64  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1259  phage terminase, large subunit, PBSX family  34.38 
 
 
416 aa  210  4e-53  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.230021  n/a   
 
 
-
 
NC_009674  Bcer98_2947  PBSX family phage terminase large subunit  34.32 
 
 
434 aa  206  8e-52  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0833  PBSX family phage terminase large subunit  29.86 
 
 
431 aa  171  2e-41  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0887  PBSX family phage terminase large subunit  31.49 
 
 
431 aa  170  4e-41  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00102224  n/a   
 
 
-
 
NC_009632  SaurJH1_0905  PBSX family phage terminase large subunit  31.49 
 
 
431 aa  170  4e-41  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0835429  n/a   
 
 
-
 
NC_010644  Emin_0848  PBSX family phage terminase large subunit  27.34 
 
 
397 aa  102  1e-20  Elusimicrobium minutum Pei191  Bacteria  normal  hitchhiker  0.00062306 
 
 
-
 
NC_007204  Psyc_1001  PBSX family phage terminase large subunit  26.9 
 
 
421 aa  89.7  1e-16  Psychrobacter arcticus 273-4  Bacteria  normal  hitchhiker  0.00252251 
 
 
-
 
NC_010002  Daci_4099  PBSX family phage terminase large subunit  25.58 
 
 
414 aa  87.8  3e-16  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.000000271787 
 
 
-
 
NC_011094  SeSA_A0633  phage terminase, large subunit, pbsx family  22.98 
 
 
439 aa  69.3  0.0000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.0000041592 
 
 
-
 
NC_008687  Pden_3756  PBSX family phage terminase large subunit  29.25 
 
 
441 aa  52.8  0.00001  Paracoccus denitrificans PD1222  Bacteria  normal  0.893937  normal  0.0951984 
 
 
-
 
NC_009800  EcHS_A0309  PBSX family phage terminase large subunit  26.13 
 
 
471 aa  50.4  0.00005  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1143  phage terminase, large subunit, PBSX family  24.08 
 
 
424 aa  45.1  0.002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>