24 homologs were found in PanDaTox collection
for query gene Mrad2831_5696 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_5696  PBSX family phage terminase large subunit  100 
 
 
440 aa  905    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2427  terminase large subunit  81.27 
 
 
342 aa  566  1e-160  Methylobacterium extorquens PA1  Bacteria  normal  0.484378  normal 
 
 
-
 
NC_007614  Nmul_A1463  Phage terminase, large subunit, PBSX  60.2 
 
 
417 aa  508  1e-143  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.8452  n/a   
 
 
-
 
NC_011369  Rleg2_1143  phage terminase, large subunit, PBSX family  36.34 
 
 
424 aa  242  1e-62  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1942  PBSX family phage terminase large subunit  34.19 
 
 
433 aa  235  1.0000000000000001e-60  Delftia acidovorans SPH-1  Bacteria  normal  0.16151  hitchhiker  0.000128888 
 
 
-
 
NC_011004  Rpal_3056  phage terminase, large subunit, PBSX family  35.34 
 
 
421 aa  232  9e-60  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.345936  n/a   
 
 
-
 
NC_009485  BBta_5804  putative phage terminase large subunit  34.45 
 
 
428 aa  213  5.999999999999999e-54  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0309  PBSX family phage terminase large subunit  47.09 
 
 
471 aa  203  4e-51  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_008783  BARBAKC583_0227  PBSX family phage terminase large subunit  33.5 
 
 
402 aa  202  7e-51  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2354  hypothetical protein  43.33 
 
 
490 aa  175  9.999999999999999e-43  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2189  hypothetical protein  38.01 
 
 
324 aa  168  2e-40  Yersinia pestis Angola  Bacteria  normal  normal  0.580181 
 
 
-
 
NC_011883  Ddes_0719  hypothetical protein  37.08 
 
 
461 aa  151  2e-35  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1003  putative DNA packaging protein GP17 (terminase)  36.22 
 
 
504 aa  152  2e-35  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_4099  PBSX family phage terminase large subunit  37.66 
 
 
414 aa  144  4e-33  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.000000271787 
 
 
-
 
NC_011094  SeSA_A0633  phage terminase, large subunit, pbsx family  37.5 
 
 
439 aa  138  2e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.0000041592 
 
 
-
 
NC_011369  Rleg2_0726  putative terminase large subunit protein  36.32 
 
 
523 aa  128  2.0000000000000002e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.964001  normal 
 
 
-
 
NC_007204  Psyc_1001  PBSX family phage terminase large subunit  36.68 
 
 
421 aa  127  3e-28  Psychrobacter arcticus 273-4  Bacteria  normal  hitchhiker  0.00252251 
 
 
-
 
NC_014150  Bmur_1150  phage terminase, large subunit, PBSX family  30.84 
 
 
456 aa  113  6e-24  Brachyspira murdochii DSM 12563  Bacteria  normal  0.467738  n/a   
 
 
-
 
NC_008752  Aave_1699  putative terminase large subunit protein  33.65 
 
 
539 aa  101  2e-20  Acidovorax citrulli AAC00-1  Bacteria  normal  0.140873  normal  0.0380156 
 
 
-
 
NC_008687  Pden_3756  PBSX family phage terminase large subunit  31.7 
 
 
441 aa  100  5e-20  Paracoccus denitrificans PD1222  Bacteria  normal  0.893937  normal  0.0951984 
 
 
-
 
NC_010655  Amuc_0386  hypothetical protein  32.51 
 
 
543 aa  88.2  3e-16  Akkermansia muciniphila ATCC BAA-835  Bacteria  decreased coverage  0.00110205  normal 
 
 
-
 
NC_008752  Aave_2353  putative terminase large subunit protein  30.46 
 
 
527 aa  84.3  0.000000000000004  Acidovorax citrulli AAC00-1  Bacteria  normal  0.158978  unclonable  0.0000000253606 
 
 
-
 
NC_011779  BbuZS7_G21  phage terminase, large subunit, pbsx family protein  23.84 
 
 
396 aa  58.2  0.0000003  Borrelia burgdorferi ZS7  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2947  PBSX family phage terminase large subunit  22.38 
 
 
434 aa  44.3  0.004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
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