Gene Mext_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2427 
Symbol 
ID5834077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2733710 
End bp2734738 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content65% 
IMG OID641368228 
Productterminase large subunit 
Protein accessionYP_001639893 
Protein GI163851850 
COG category[R] General function prediction only 
COG ID[COG1783] Phage terminase large subunit 
TIGRFAM ID[TIGR01547] phage terminase, large subunit, PBSX family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.484378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTG AGTTCCCGGA GCGGCTCGAC TTCCTGTTCG AGCCCGCCCG CTACAAGATC 
GCCTACGGCG GACGCGGCGG CGCGAAGTCG TGGGGCTTCG GCCGGGCGCT GCTCATCATG
GGCGCGCAGA AGAAGATCCG CGTGCTTTGC GCCCGCGAGT TCCAGAATTC GATCGCGGAG
TCGGCGCACG CGCTGCTCAG CCAGCAAATC GACCTCCTCG GCCTCTCTGG CTTCTACGAG
ATCCAGGAGA AGCGCGTCCT CGGCTCCAAC GGGACCGAGT TCATCTTCAA GGGGCTCCGG
CACAACGTCG CCTCGGTGAA ATCGACCGAG GGCATCGACG TGTGCTGGGT CGAGGAAGCC
CGCACCGTCT CGAAATCCTC CTGGGACGTG CTGATTCCCA CCATCCGCAA GGAAGGGTCT
GAGATCTGGA TCAGCTTCAA CCCGGAGCTG GAGGAAGACG AGACCTATAA GCGGTTCGTG
AAGAACCCGC CGACCGGCGC CAAGGTCGTG AAGATCGGCT GGCAGGACAA TCCCTGGTTC
CCCGACGTCC TGAAGCAGGA AGCGCTCGAC CTGAAGGCGC GCGATCCGGC CGCCTACCTC
ACGGTCTGGG ACGGTCACTG CAAGGTGGTG CTCGACGGCG CAATCTACGC CAACGAGATC
ATGGCCGCGA CGGAGGCGAA CCGCTTCATC CGCGTGCCCT ATGACGGCAC CAAGCCGGTG
CACACGTTCT GGGATCTCGG CCGGGCCGAC ATGACCGCGA TCTGGTTCGC GCAGGTTGTC
GGCTTCGAGT TCCGGATCAT CGACTATTAC CAGAACCGCG GGCACGCGCT CGGGCACTAC
CTGAAGCACC TCCAGGCCCG GCCCTACGTC TACGGCGACC ACTGGCTGCC GCACGACGCC
ACGAACGAGC TGCTGGGCTC CGAACGCACG ATCGCGCAGC AGATGGAATC CGCGGGCTTC
ACCGTGAGTG GAGCGGCGGG CTTCTTGAGT CTGAACGGTG CGGTTTCAGA CCGCGCCTGC
GACGCGTAG
 
Protein sequence
MTVEFPERLD FLFEPARYKI AYGGRGGAKS WGFGRALLIM GAQKKIRVLC AREFQNSIAE 
SAHALLSQQI DLLGLSGFYE IQEKRVLGSN GTEFIFKGLR HNVASVKSTE GIDVCWVEEA
RTVSKSSWDV LIPTIRKEGS EIWISFNPEL EEDETYKRFV KNPPTGAKVV KIGWQDNPWF
PDVLKQEALD LKARDPAAYL TVWDGHCKVV LDGAIYANEI MAATEANRFI RVPYDGTKPV
HTFWDLGRAD MTAIWFAQVV GFEFRIIDYY QNRGHALGHY LKHLQARPYV YGDHWLPHDA
TNELLGSERT IAQQMESAGF TVSGAAGFLS LNGAVSDRAC DA