| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1942 |
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| Symbol | |
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| ID | 5747500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2131018 |
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| End bp | 2132319 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641297021 |
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| Product | PBSX family phage terminase large subunit |
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| Protein accession | YP_001562967 |
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| Protein GI | 160897385 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01547] phage terminase, large subunit, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.16151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000128888 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACCG CGCAGATTGC CATCCCCGAG AAGCTGATTG AGCTGTTCTC GGGGGAGGCA
GACGTGCGCG CGTGTGATGG CGGTCGTGGG TCTGGCAAGA CGCGCAGTTT CGCCAAGATG
GCTGCGGTCA AGGGCTACCA GTACGGCAAG GCGGGTGTCA CTGGCATCTT GCTGTGCGCC
CGACAGTTCA TGAACTCGCT GGAAGACTCC AGCCTGGAAG AGTGCAAGCG GGCCATTGAG
GATGAGCCAT GGCTTGCTGC CTACTACGAC GTTGGCGACA AGTACATCAA GAGCCGCGAT
GGGCGGATCA CGTTCGCGTT TGCTGGCTTG GACCGCAACA TCGCGTCGAT CAAGTCCAAG
GGCCGCCTAC TGCTGTGCTG GGTTGATGAG GCCGAGCCAG TGACCGACGA GGCTTGGACG
ACGCTGATCC CAACCCTGCG AGAAGAGGGC ACTGATTGGA ACGCTGAACT CTGGGTGACA
TGGAACCCGA AGCGCAAGAG CGCGCCGGTC GAGAAGCGGT TCAAAGGGTC GAGCGATCCG
CGCATGAAGT ACGTGCGCTG CAACTGGAAG GACAACCCGA AGTTCCCCGC GCTGCTCGAG
CGTGTGCGCC TGCGCGACCT GGCTGAACGC CCAGAGCAGT ACGCGCACAT ATGGGAAGGC
GATTACGCCA CGGTGATCGA GGGCGCGTAC TTCGCATCGC ACATCGTCAA AGCGCGCCAG
GACAACAGGA TTGGCCGCGT GCCGGCCGAC CCGCTGATGA CGCTGAGGGC CTTTGTGGAC
ATCGGCGGCA CAGGCGCCAG GGCTGATGCC TTCGCGATGT GGATTGCGCA GTTCGTCGGC
AAAGAGATTC GAGTGCTCGA CTACTACGAG CAGGTCGGCC AGCCGCTGTC ATCGCATCTG
AACTGGATGC GTGAGAAGGG CTACGACAAG GCCCAGATCT GGCTGCCACA CGATGGCGCC
ACACAAGACA AGGTGCACGA CGTGTCCTAT GAGTCCGCGC TACGCCAGGC TGGCTACACG
GTCACGGTCG TGCCGAACCA GGGCAAGGGC GCTGCAAAGG CTCGTATTGA GGCCGGCAGG
CGTCTGTTCG GGTCGATGTG GTTCAACGAG GCCACAACCC AGCCAGGCCT TGAGGCGCTG
GGCTGGTATC ACGAAAAGCG AGACGAGCAG CGCGGCATCG GCCTAGGTCC AGAACACGAC
TGGTCGAGCC ACGGTGCTGA TGCATTCGGG CTGATGTGCG TGGCTTATGA AGAGCCGCGC
GAGTCCAAGC CCCTGAACTA TCCAAGACTG AGCCACGCAT GA
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| Protein sequence | MTTAQIAIPE KLIELFSGEA DVRACDGGRG SGKTRSFAKM AAVKGYQYGK AGVTGILLCA
RQFMNSLEDS SLEECKRAIE DEPWLAAYYD VGDKYIKSRD GRITFAFAGL DRNIASIKSK
GRLLLCWVDE AEPVTDEAWT TLIPTLREEG TDWNAELWVT WNPKRKSAPV EKRFKGSSDP
RMKYVRCNWK DNPKFPALLE RVRLRDLAER PEQYAHIWEG DYATVIEGAY FASHIVKARQ
DNRIGRVPAD PLMTLRAFVD IGGTGARADA FAMWIAQFVG KEIRVLDYYE QVGQPLSSHL
NWMREKGYDK AQIWLPHDGA TQDKVHDVSY ESALRQAGYT VTVVPNQGKG AAKARIEAGR
RLFGSMWFNE ATTQPGLEAL GWYHEKRDEQ RGIGLGPEHD WSSHGADAFG LMCVAYEEPR
ESKPLNYPRL SHA
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