23 homologs were found in PanDaTox collection
for query gene Franean1_1788 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_1788  regulatory protein TetR  100 
 
 		 219 aa  431  1e-120  Frankia sp. EAN1pec  Bacteria  normal  0.312966  normal  0.707323 
 
 
-
 
NC_009921  Franean1_6398  TetR family transcriptional regulator  54.93 
 
 		 216 aa  226  2e-58  Frankia sp. EAN1pec  Bacteria  normal  0.237377  normal  0.139481 
 
 
-
 
NC_008726  Mvan_2323  TetR family transcriptional regulator  50.79 
 
 		 206 aa  180  1e-44  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.169023  normal  0.0173664 
 
 
-
 
NC_009921  Franean1_3925  TetR family transcriptional regulator  46.38 
 
 		 213 aa  167  1e-40  Frankia sp. EAN1pec  Bacteria  normal  0.376299  normal  0.034998 
 
 
-
 
NC_013216  Dtox_3058  transcriptional regulator, TetR family  29.9 
 
 		 204 aa  61.2  0.00000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00000151008  decreased coverage  0.0000000705144 
 
 
-
 
NC_008705  Mkms_3148  TetR family transcriptional regulator  36.56 
 
 		 235 aa  53.9  0.000002  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.435592 
 
 
-
 
NC_008705  Mkms_5257  TetR family transcriptional regulator  37.5 
 
 		 215 aa  53.5  0.000002  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_5168  TetR family transcriptional regulator  37.5 
 
 		 215 aa  53.5  0.000002  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_3108  TetR family transcriptional regulator  36.56 
 
 		 235 aa  53.9  0.000002  Mycobacterium sp. JLS  Bacteria  normal  0.90259  normal  1 
 
 
-
 
NC_009077  Mjls_5549  TetR family transcriptional regulator  37.5 
 
 		 215 aa  53.5  0.000002  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_3088  TetR family transcriptional regulator  36.56 
 
 		 235 aa  53.9  0.000002  Mycobacterium sp. MCS  Bacteria  normal  0.215093  n/a   
 
 
-
 
NC_009338  Mflv_3637  TetR family transcriptional regulator  32.08 
 
 		 228 aa  48.1  0.00009  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_3660  resolvase domain-containing protein  32.54 
 
 		 203 aa  47  0.0002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_2776  TetR family transcriptional regulator  36.84 
 
 		 213 aa  45.1  0.0008  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.556184  normal  0.492186 
 
 
-
 
NC_009921  Franean1_3010  TetR family transcriptional regulator  39.71 
 
 		 218 aa  45.1  0.0008  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_4749  transcriptional regulator, TetR family  33.66 
 
 		 227 aa  45.1  0.0008  Variovorax paradoxus S110  Bacteria  normal  0.515185  n/a   
 
 
-
 
NC_011883  Ddes_1862  transcriptional regulator, TetR family  28.57 
 
 		 213 aa  44.7  0.001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.349014  n/a   
 
 
-
 
NC_013441  Gbro_2572  regulatory protein TetR  39.06 
 
 		 238 aa  43.1  0.003  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007204  Psyc_1665  TetR family transcriptional regulator  35.38 
 
 		 221 aa  43.5  0.003  Psychrobacter arcticus 273-4  Bacteria  normal  0.271808  normal  1 
 
 
-
 
NC_008789  Hhal_1987  TetR family transcriptional regulator  27.14 
 
 		 210 aa  42.7  0.004  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007969  Pcryo_1914  TetR family transcriptional regulator  32.63 
 
 		 221 aa  42.7  0.004  Psychrobacter cryohalolentis K5  Bacteria  decreased coverage  0.0000166268  normal  0.222991 
 
 
-
 
NC_013235  Namu_0880  transcriptional regulator, TetR family  30.51 
 
 		 212 aa  42  0.007  Nakamurella multipartita DSM 44233  Bacteria  normal  0.987052  normal  1 
 
 
-
 
NC_002977  MCA0726  TetR family transcriptional regulator  25.14 
 
 		 201 aa  41.6  0.01  Methylococcus capsulatus str. Bath  Bacteria  normal  0.892311  n/a   
 
 
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