Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1665 |
Symbol | |
ID | 3515633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2062387 |
End bp | 2063052 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637670361 |
Product | TetR family transcriptional regulator |
Protein accession | YP_264947 |
Protein GI | 71066220 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.271808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCAAA GTGCTAAAAC AAATACCCCA TCTGCCTCTG AGGGCGTGGT TCATCGCAAT CAGCAAGATA TTCGTGCTCA AAATCAAGCG GTGATTTTGA CTGCCGCTGA AGAAGAGTTT GTGCTACAAA GCTATCGCGG TGCCACGATG CAGGGTATTG CTGATCGAGC AGGGCTACCA AAAGCCAATG TACATTACTA CTTTAAGAAT AAGAAAAATC TGTACGAAAT GGTCTTGCGC ACCATTATTC AAGAGTGGAA TGATGGCTTG GTGACGATGA CGGTAGATAG CGATCCCAAA ACAGTTATCG AAAAATTTGT CCGCACCAAA TTGCATCAAG CGTTTGCGCA CCCAAACCGC CATAAGCTAT TCGCGTTAGA GGTCATCGGC GGTGCCCCGC ATTTACATGA TTTTATGTCG ACTGCGATGA AAGATTGGGC ACTGGATAAA ACACAAGTCA TGAAAACATG GCACGAGCAA GGCAAAATCG CCATTGCTGA CCCCTTACAG CTATTGATTT TGATTTGGGC AACCACGCAG CGCTATGCAG AGTTTGAAAC AGAAATCGTC GGTTTGATGC AAAAGAGCGC GTATGATGAG ACAGACGAGG CACGCGCCGC TGACTTCTTA ATACCTTTTA TACTACGGGG TTGCGGACTC GAGTAG
|
Protein sequence | MTQSAKTNTP SASEGVVHRN QQDIRAQNQA VILTAAEEEF VLQSYRGATM QGIADRAGLP KANVHYYFKN KKNLYEMVLR TIIQEWNDGL VTMTVDSDPK TVIEKFVRTK LHQAFAHPNR HKLFALEVIG GAPHLHDFMS TAMKDWALDK TQVMKTWHEQ GKIAIADPLQ LLILIWATTQ RYAEFETEIV GLMQKSAYDE TDEARAADFL IPFILRGCGL E
|
| |