| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0880 |
|---|
| Symbol | |
|---|
| ID | 8446472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 972610 |
|---|
| End bp | 973248 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645040017 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003200280 |
|---|
| Protein GI | 258651124 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.987052 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCAGG CGTTGGACGA GCGGAACGCA CGGCAGGCGG CGCGGACCGA CGCCCGGGTG
CAACGACGGC GACGGCAGAT CCTGGATGCG GCGACCGAGG TGATGTCCAC GACCGGATTC
CACGCCACCT CCATGCAGGC GGTGGCCGAA CGGGCCGGGA TCAGTGTCGG GCTGATCTAC
CAGTACTTCG GCAACAAGGA CGAGCTGCTC GTCGCGGTGA TCGTGGACAT CCTGGAGGAC
TTCCGGGATC AGGTGCCGGC GGCGATCGCG GCGGCCGGGG AGGATCCGGT CGACCGGTTC
GGCGCCGCGT TCCGGATCTG TTGCCAGGTC GTCGAGGCCA AGCGGGAGGC GGTGACCCTG
ACCTACCGCG AGAGCCGAAC GCTGCCGGCC GACGGTCTGG AGCGGATCAA GGACCTGGAA
CTGCAGACGG CCGAGCCGAT CCGACAGGCG GTGGCCGACG GCATCGACGC GGGGGTCTTC
CGCGCCGTCG ATGCCCGGCT GGTGGTGCAC AACGTGCTGC TGCTGGCCCA TGCCTGGGCG
CTCAAGCACT GGAACCTGGC CCGGTTCCTG ACGCTGGATC AGTACATCGA ACAGGAGTGG
GCCCTGCTGC TCGCCTCGGT CTCGCCGCGA GCGCAGTGA
|
|---|
| Protein sequence | MGQALDERNA RQAARTDARV QRRRRQILDA ATEVMSTTGF HATSMQAVAE RAGISVGLIY
QYFGNKDELL VAVIVDILED FRDQVPAAIA AAGEDPVDRF GAAFRICCQV VEAKREAVTL
TYRESRTLPA DGLERIKDLE LQTAEPIRQA VADGIDAGVF RAVDARLVVH NVLLLAHAWA
LKHWNLARFL TLDQYIEQEW ALLLASVSPR AQ
|
|---|
| |