Gene Hhal_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1987 
Symbol 
ID4710326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp2190352 
End bp2190984 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID639856460 
ProductTetR family transcriptional regulator 
Protein accessionYP_001003553 
Protein GI121998766 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCGC CCATGCCCGA GAACACCGGA CGCACCGAAG CCGCCGAGCG GATCCTTGCC 
GCCGCCAAGC ACCTGTTCGC CCGCGACGGC TACAGCTCCG TCTCGATCCG CGACATCGCC 
GAGGCCGCCG GCGTCAGCAA GGCCAACGTC TTCCACCACT TCGCCTCCAA GGAGGAACTC 
TACGTGGAGA CGCTGCGCCG CTGCTGCGAA GCGGCGCGGG CGTTGATCCA GGCCTTCGCC 
GAAGATCAGG CGCGGGAACC GGCCGAACAG CTGCGCGCCT TCGTCCGCGC CGACCTCCGG 
CGCGCCCTGG ACGACCCCGA CGCCACCCGC TTGGTGTTGG CCGAGGCCTT CGACGCCTCG 
CCGAGCCAGG CCCGGACCCT GGTCAACCAG GTCTTCGGCG CCGATTTCCG GCGTATGACG 
GAGATCTTCT CGCGGGGCCA GGAAGACGGC TCGTGGCGGC AGGACACCAG CCCCGCGCTG 
ATGGCCTCAC TGATGCTGGC CGCCAACACC TTCTACACCG CTCACCGAGA GGTCCTGCGC 
CAGCTCCCCG GCGTGGACTT CGCCGACGAC CCTGATCAGT ACGCGGATCA CGTCGTCGAC 
ATCCTGCTCG ACGGGATCCA AAAGGAGGCG TAA
 
Protein sequence
MAAPMPENTG RTEAAERILA AAKHLFARDG YSSVSIRDIA EAAGVSKANV FHHFASKEEL 
YVETLRRCCE AARALIQAFA EDQAREPAEQ LRAFVRADLR RALDDPDATR LVLAEAFDAS 
PSQARTLVNQ VFGADFRRMT EIFSRGQEDG SWRQDTSPAL MASLMLAANT FYTAHREVLR 
QLPGVDFADD PDQYADHVVD ILLDGIQKEA