Gene Mmcs_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3088 
Symbol 
ID4111920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand- 
Start bp3267765 
End bp3268472 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content69% 
IMG OID638032218 
ProductTetR family transcriptional regulator 
Protein accessionYP_640251 
Protein GI108800054 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.215093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCGGA AGGGGCGGGC CAGGGCAGCG GCGCGCGCCC GGGGGCGGCC GGTTGGGGCC 
GATTCCGCGG AAACCCGTAG GCAGATCGTC CGCGCCGGGC GCGTGGTCCT CATCGAGCGG 
GGCTACTCCG GTATGACGTT CCAGGCCATC GCCGAACGCA CCGGGCTGAG CCGGCCGACC 
CTGCACTACT ACTTCGCCAC CCGCGAAGAG GTCTACGAAG GCATCGTCAC GGAGATGCGC 
GAGATCGTGG TCGACTGCGT CGAGCACTCG CTACGGCACG ACCGGTTGCT CGACCGGTTG 
GCGGCGTTCG TGGCCGCCGT GCGGCGCGTC GACCATCGGG ATCCGTCGGT GGTGCCGTTC 
CTGATCAGCG CGCGCCTCGA ACCGCAGCGC AATCCCGAAT TGCAGGCGAT CAGCGAGTCG 
CCGGTCCGGG CCTTCCTGAT GCGGTTGGTC TCCGATGCGA TCCGCCGCGG TGAACTCGAC 
GACGACACCG ACGTCGAGGG CGTCTCCGAC ATGCTCCACG TCATCCTGTA CGGGATGGCG 
TTCTATTCCG GTTTCACCAA CGGCCCCGCG GAGTTGGGCA CGATTGCCAA GCAACTGATC 
GAATTGTTCG CCCACGGCCT GGTGGCAGGC CCGCGCGGGC CGGATCCCGC CGGCGGGGGT 
GAAGACACGC TCCGCGACAC GCCGAAGGGT GTCGGACCGC GGTCCTAG
 
Protein sequence
MQRKGRARAA ARARGRPVGA DSAETRRQIV RAGRVVLIER GYSGMTFQAI AERTGLSRPT 
LHYYFATREE VYEGIVTEMR EIVVDCVEHS LRHDRLLDRL AAFVAAVRRV DHRDPSVVPF 
LISARLEPQR NPELQAISES PVRAFLMRLV SDAIRRGELD DDTDVEGVSD MLHVILYGMA 
FYSGFTNGPA ELGTIAKQLI ELFAHGLVAG PRGPDPAGGG EDTLRDTPKG VGPRS