More than 300 homologs were found in PanDaTox collection
for query gene Francci3_0463 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_0463  binding-protein-dependent transport systems inner membrane component  100 
 
 
321 aa  613  1e-175  Frankia sp. CcI3  Bacteria  normal  0.0784866  normal  0.30892 
 
 
-
 
NC_009921  Franean1_6154  binding-protein-dependent transport systems inner membrane component  70.26 
 
 
307 aa  390  1e-107  Frankia sp. EAN1pec  Bacteria  normal  normal  0.861609 
 
 
-
 
NC_007778  RPB_0175  binding-protein dependent transport system inner membrane protein  39.25 
 
 
278 aa  187  2e-46  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.419307  normal 
 
 
-
 
NC_011004  Rpal_0130  binding-protein-dependent transport systems inner membrane component  41 
 
 
278 aa  187  2e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.519096  n/a   
 
 
-
 
NC_007958  RPD_3150  binding-protein-dependent transport systems inner membrane component  38.87 
 
 
278 aa  186  4e-46  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.198934  normal  0.328694 
 
 
-
 
NC_014213  Mesil_3228  binding-protein-dependent transport systems inner membrane component  37.12 
 
 
272 aa  171  2e-41  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00685083  normal 
 
 
-
 
NC_014213  Mesil_3420  proteophosphoglycan ppg4  37.12 
 
 
272 aa  171  2e-41  Meiothermus silvanus DSM 9946  Bacteria  normal  0.257772  normal 
 
 
-
 
NC_012669  Bcav_2601  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
275 aa  167  2e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.260696  normal 
 
 
-
 
NC_013131  Caci_7904  binding-protein-dependent transport systems inner membrane component  39.25 
 
 
271 aa  164  3e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1528  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
307 aa  162  7e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.607833  normal  0.154885 
 
 
-
 
NC_013521  Sked_18870  carbohydrate ABC transporter membrane protein  31.68 
 
 
319 aa  162  9e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.858818  normal  0.355174 
 
 
-
 
NC_009667  Oant_0638  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
295 aa  161  2e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3148  binding-protein-dependent transport systems inner membrane component  34.68 
 
 
311 aa  160  3e-38  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00417428  n/a   
 
 
-
 
NC_014165  Tbis_2716  binding-protein-dependent transporter inner membrane component  33.22 
 
 
293 aa  160  3e-38  Thermobispora bispora DSM 43833  Bacteria  normal  0.684184  normal 
 
 
-
 
NC_009939  Dgeo_2917  ABC-type sugar transport system, permease component  36.5 
 
 
273 aa  159  4e-38  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_21170  carbohydrate ABC transporter membrane protein  37.4 
 
 
302 aa  159  7e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.281989  normal  0.140209 
 
 
-
 
NC_013172  Bfae_30850  ABC-type sugar transport system, permease component  33.83 
 
 
315 aa  158  1e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1729  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
275 aa  156  3e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_2243  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
307 aa  156  5.0000000000000005e-37  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.556058 
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
273 aa  155  7e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0831  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
310 aa  155  8e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_2662  binding-protein-dependent transport systems inner membrane component  30.27 
 
 
304 aa  155  8e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011981  Avi_7591  ABC transporter membrane spanning protein  36.73 
 
 
275 aa  154  2e-36  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0471  ABC-type sugar transport system permease component-like  36.26 
 
 
276 aa  153  4e-36  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2048  binding-protein-dependent transport systems inner membrane component  33.6 
 
 
268 aa  152  1e-35  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.353997  n/a   
 
 
-
 
NC_011881  Achl_4623  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
285 aa  151  1e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2207  binding-protein-dependent transport systems inner membrane component  36.08 
 
 
299 aa  150  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2317  binding-protein-dependent transport systems inner membrane component  33.96 
 
 
299 aa  150  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4633  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
275 aa  151  2e-35  Nocardioides sp. JS614  Bacteria  normal  0.326622  n/a   
 
 
-
 
NC_012669  Bcav_0827  binding-protein-dependent transport systems inner membrane component  37.36 
 
 
295 aa  150  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.122805 
 
 
-
 
NC_009767  Rcas_0114  binding-protein-dependent transport systems inner membrane component  34.88 
 
 
299 aa  150  2e-35  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0163331  normal 
 
 
-
 
NC_008541  Arth_3141  binding-protein-dependent transport systems inner membrane component  35.54 
 
 
300 aa  149  6e-35  Arthrobacter sp. FB24  Bacteria  normal  0.522421  n/a   
 
 
-
 
NC_012669  Bcav_2818  binding-protein-dependent transport systems inner membrane component  36.7 
 
 
311 aa  149  6e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.316897  normal 
 
 
-
 
NC_013526  Tter_2572  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
281 aa  149  7e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2947  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
284 aa  149  9e-35  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29880  carbohydrate ABC transporter membrane protein  31.74 
 
 
304 aa  149  9e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4567  binding-protein-dependent transport systems inner membrane component  35.91 
 
 
299 aa  148  1.0000000000000001e-34  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5330  ABC transporter  34.22 
 
 
274 aa  148  1.0000000000000001e-34  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0895  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
300 aa  147  2.0000000000000003e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.150269  normal  0.306181 
 
 
-
 
NC_009636  Smed_3327  binding-protein-dependent transport systems inner membrane component  36.29 
 
 
295 aa  147  2.0000000000000003e-34  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.925961 
 
 
-
 
NC_009664  Krad_0296  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
301 aa  147  2.0000000000000003e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0210527 
 
 
-
 
NC_013411  GYMC61_2729  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
293 aa  147  2.0000000000000003e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_3981  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
274 aa  147  2.0000000000000003e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.270796  normal 
 
 
-
 
NC_010003  Pmob_0956  monosaccharide-transporting ATPase  33.45 
 
 
277 aa  147  2.0000000000000003e-34  Petrotoga mobilis SJ95  Bacteria  normal  0.0922285  n/a   
 
 
-
 
NC_010003  Pmob_1378  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
743 aa  147  2.0000000000000003e-34  Petrotoga mobilis SJ95  Bacteria  normal  0.445152  n/a   
 
 
-
 
NC_011886  Achl_3269  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
301 aa  147  3e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011886  Achl_0497  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
306 aa  147  3e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000825086 
 
 
-
 
NC_012669  Bcav_1507  binding-protein-dependent transport systems inner membrane component  32.61 
 
 
303 aa  147  3e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.659062  normal 
 
 
-
 
NC_012669  Bcav_1657  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
284 aa  147  3e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.354053  normal  0.174244 
 
 
-
 
NC_012669  Bcav_1700  binding-protein-dependent transport systems inner membrane component  34.58 
 
 
293 aa  146  5e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2820  binding-protein-dependent transport systems inner membrane component  33.98 
 
 
299 aa  145  7.0000000000000006e-34  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.0050805  normal 
 
 
-
 
NC_013595  Sros_5308  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
319 aa  145  7.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.248694  normal 
 
 
-
 
NC_011886  Achl_1751  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
313 aa  145  9e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000624363 
 
 
-
 
NC_013595  Sros_7693  putative transmembrane permease component of ABC transporter  31.01 
 
 
286 aa  145  9e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.673988 
 
 
-
 
NC_011369  Rleg2_4017  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
292 aa  145  1e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.924355  normal 
 
 
-
 
NC_014210  Ndas_1083  binding-protein-dependent transport systems inner membrane component  30.21 
 
 
301 aa  145  1e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.521844  normal  0.416861 
 
 
-
 
NC_013526  Tter_2293  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
297 aa  145  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2544  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
299 aa  145  1e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.238071  normal  0.0688071 
 
 
-
 
NC_012669  Bcav_1532  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
305 aa  145  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.995394  normal  0.0303683 
 
 
-
 
NC_013526  Tter_2216  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
301 aa  144  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2464  binding-protein-dependent transport systems inner membrane component  31.41 
 
 
270 aa  144  2e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  0.668515  normal  0.267306 
 
 
-
 
NC_013172  Bfae_29710  carbohydrate ABC transporter membrane protein  33.33 
 
 
304 aa  144  2e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  0.942295  n/a   
 
 
-
 
NC_009486  Tpet_0320  monosaccharide-transporting ATPase  39.06 
 
 
701 aa  144  2e-33  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0320  binding-protein-dependent transport systems inner membrane component  32.65 
 
 
300 aa  144  2e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1730  binding-protein-dependent transport systems inner membrane component  36.53 
 
 
285 aa  144  3e-33  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0000816013  n/a   
 
 
-
 
NC_012669  Bcav_2874  binding-protein-dependent transport systems inner membrane component  31.92 
 
 
304 aa  143  3e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0465217 
 
 
-
 
NC_008699  Noca_0043  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
290 aa  143  4e-33  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_4346  binding-protein-dependent transport systems inner membrane component  36.22 
 
 
292 aa  143  4e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000934569 
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
275 aa  143  4e-33  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0956  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
286 aa  143  5e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.143013 
 
 
-
 
NC_009718  Fnod_0396  binding-protein-dependent transport systems inner membrane component  33.02 
 
 
722 aa  142  5e-33  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0626826  n/a   
 
 
-
 
NC_012793  GWCH70_1391  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
270 aa  143  5e-33  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1636  sugar ABC transporter, permease  30.53 
 
 
277 aa  142  6e-33  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2301  binding-protein-dependent transport systems inner membrane component  37.71 
 
 
285 aa  142  6e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.866945  n/a   
 
 
-
 
NC_012669  Bcav_3574  Monosaccharide-transporting ATPase  32.62 
 
 
290 aa  142  6e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.156852  normal 
 
 
-
 
NC_013131  Caci_3806  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
300 aa  142  7e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0915  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
280 aa  142  7e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0338  monosaccharide-transporting ATPase  39.13 
 
 
701 aa  142  9.999999999999999e-33  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0043  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
270 aa  141  9.999999999999999e-33  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0754  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
289 aa  141  9.999999999999999e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.467109  normal 
 
 
-
 
NC_012669  Bcav_2265  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
298 aa  141  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.15321  normal 
 
 
-
 
NC_011884  Cyan7425_4398  Monosaccharide-transporting ATPase  33.71 
 
 
281 aa  141  1.9999999999999998e-32  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.000709548  normal  0.804646 
 
 
-
 
NC_013721  HMPREF0424_1314  ABC transporter, permease protein  32.97 
 
 
273 aa  140  1.9999999999999998e-32  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_0646  binding-protein-dependent transport systems inner membrane component  31.78 
 
 
301 aa  141  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0063  binding-protein-dependent transport systems inner membrane component  28.96 
 
 
291 aa  140  1.9999999999999998e-32  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_06290  carbohydrate ABC transporter membrane protein  32.54 
 
 
291 aa  140  1.9999999999999998e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0605  putative glycerol-3-phosphate ABC transporter, permease protein  32.29 
 
 
273 aa  140  3e-32  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0479  glycerol-3-phosphate ABC transporter, permease  32.14 
 
 
273 aa  140  3.9999999999999997e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0481  glycerol-3-phosphate ABC transporter, permease  32.14 
 
 
273 aa  140  3.9999999999999997e-32  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4734  putative glycerol-3-phosphate ABC transporter, permease protein  32.14 
 
 
273 aa  140  3.9999999999999997e-32  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0624  putative glycerol-3-phosphate ABC transporter, permease protein  32.14 
 
 
273 aa  140  3.9999999999999997e-32  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_3958  putative sugar transporter, permease protein  33.21 
 
 
300 aa  140  3.9999999999999997e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.450526  normal  0.0364521 
 
 
-
 
NC_010184  BcerKBAB4_0482  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
273 aa  140  3.9999999999999997e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0631  glycerol-3-phosphate ABC transporter, permease protein, putative  31.7 
 
 
273 aa  139  4.999999999999999e-32  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1901  sugar ABC transporter, permease protein  30.15 
 
 
277 aa  139  4.999999999999999e-32  Bacillus cereus ATCC 10987  Bacteria  normal  0.682079  n/a   
 
 
-
 
NC_005945  BAS0537  glycerol-3-phosphate ABC transporter permease  32.14 
 
 
273 aa  139  4.999999999999999e-32  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0568  glycerol-3-phosphate ABC transporter permease protein  32.14 
 
 
273 aa  139  4.999999999999999e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0699  putative glycerol-3-phosphate ABC transporter, permease protein  31.7 
 
 
273 aa  139  4.999999999999999e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2681  Monosaccharide-transporting ATPase  32.8 
 
 
278 aa  139  4.999999999999999e-32  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.515759  normal 
 
 
-
 
NC_008048  Sala_1021  binding-protein-dependent transport systems inner membrane component  39.22 
 
 
246 aa  139  6e-32  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
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