Gene Bcav_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3574 
Symbol 
ID7860838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3971021 
End bp3971893 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID643867677 
ProductMonosaccharide-transporting ATPase 
Protein accessionYP_002883578 
Protein GI229822052 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.156852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGT CGGCAGCCGC CGCACCGACC ACACGGCGCG GGGAGCGCCG CATCGGCGAG 
GCGAACCCGC GCTGGTGGGC CTACACGATC CTCGGGGTCG GCCTGGTCGT GGTCATGGCG
CCGTTCGTGT GGATGCTGCT CGGGTCGGTG AAGTCCGAGG GCGAGCTGCG TCAGGTGCCG
CCGACCTGGT GGCCCGAGCA GATCACGTTC GACAACTTCC GCGAGCTGTT CGCGCGGCTC
GACTTCCCGC AGTACTTCAC GAACTCGATC GTCGTCGCGG TGGCGGTGAC GCTCGGGAAC
CTCGTGTTCT GCTCGATGCT CGGCTACGCA CTGGCGAAGA TGGAGTTCGC GGGAAGGAAC
CTGCTCTTCA AGCTCGTGCT CGGGATGCTC ATGATCCCCG GCATGGTGAC GCTGGTCCCG
ATGTTCGTGC TCGTCTCGAA CATGGGCCTG GTCAACACGT ACTGGGGGCT GATCCTGCCG
TTCCTGGCAG GGCCGTTCGG CGTGTTCCTC ATGCGTCAGT TCATCGGCGG CCTTCCGGAC
GAGCTCATGG ACGCCGCCCG CGTCGACGGC GCGAGCGAGG TGCGGATCTT CGCGCGCATC
ATCATGCCGC TGTGCAAGCC GGCGCTCGCG ACGCTCGCGA TCCTCACGTT CCTCGGTTCG
TGGAACAACT TCCTGTGGCC GCTGGTCGTC GCGACGACCG AGGACAAGTA CACGCTGCCC
GTCGCTCTGG CGCTCGTGAG CGTGGGCCAG AACCAGACCC GGTACGGCCT GCTGCTCGCC
GGCGCCGTCG TCGTGGTGGT CCCCGTGCTC ATCGTCTACT TCTTCCTCCA GCGCCACTTC
GTCCAGGGCA TCGCCGTCAC CGGCATCAAG TGA
 
Protein sequence
MSASAAAAPT TRRGERRIGE ANPRWWAYTI LGVGLVVVMA PFVWMLLGSV KSEGELRQVP 
PTWWPEQITF DNFRELFARL DFPQYFTNSI VVAVAVTLGN LVFCSMLGYA LAKMEFAGRN
LLFKLVLGML MIPGMVTLVP MFVLVSNMGL VNTYWGLILP FLAGPFGVFL MRQFIGGLPD
ELMDAARVDG ASEVRIFARI IMPLCKPALA TLAILTFLGS WNNFLWPLVV ATTEDKYTLP
VALALVSVGQ NQTRYGLLLA GAVVVVVPVL IVYFFLQRHF VQGIAVTGIK