Gene Bcav_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1700 
Symbol 
ID7859642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1947828 
End bp1948709 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID643865788 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002881718 
Protein GI229820192 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCTG ACACCCTCAC CCGACCGGCC GCCGCCACCG CTACCGAGCC TCGCCGCGTG 
CGTGGCGAAC GCCGGTGGAC GCGCCGCAAC GTCGCCCTGC TCGTGGTCGG CGTGATCCTC
GGCCTCGGCA CGATCTTCCC GCTCGTCTGG ATGGTCGTCG GCGCCTTCAA GACGGCCGCC
GAGGTCAACA GCTCGAGCCT GATCCCGAGC GAGATCACGT TCGACAACTT CCGGTACGTC
TTCACCCAGG TGCCGTTCCT GCGGTACATG CTCAACAGCC TGTTCGTGGC CGGCCTCGTC
ACCGTGCTCG CGCTGTGGTT CCACTCGATG GCGGCGTATG CCCTCGCGCG GCTGCGGTTC
CCGGGCCGAG AGACGGTGTT CCTGCTCATC TTCTCGACCC TGCTGGTGAG CCTGCCGGTC
ATCCTCATCC CGACGTTCGT CGTCATCCGC ACGCTGGGTC TCGTCGACTC GTACGCCGGG
CTCGTGATCC CGGCGATCTT CAACGCGTTC GGGATCTTCC TGCTCCGCCA GTTCTACATC
TCGCTCCCGG GCGAGCTGGA GGAGGCGGCG CTCGTCGACG GCGCTGGGTA CTGGCGGATC
TACCGCAGCA TCATCCTGCC GCTGTCCCGG CCGATCATGG CGGCGCTCGC CGTGTTCTTC
TTCCTCGCGA ACTGGAACTC GTTCGTGTGG CCGTTGACGA TCACGTCGAA CCCGGACCTG
CGCGTGGTGC AGGTCGGGAT CGCCACGTTC CAGCAGCAGT ACGTCTCGGA CTGGAACTAC
GTGCTGGCGG CGGCCACCGT CGCGGCCCTG CCGACGCTCC TCATGTTCTT CTTCTTCCAG
AAGCAGATCG TGGAGTCGAT CAAGACCGCC GGGTTCAAGT AG
 
Protein sequence
MVADTLTRPA AATATEPRRV RGERRWTRRN VALLVVGVIL GLGTIFPLVW MVVGAFKTAA 
EVNSSSLIPS EITFDNFRYV FTQVPFLRYM LNSLFVAGLV TVLALWFHSM AAYALARLRF
PGRETVFLLI FSTLLVSLPV ILIPTFVVIR TLGLVDSYAG LVIPAIFNAF GIFLLRQFYI
SLPGELEEAA LVDGAGYWRI YRSIILPLSR PIMAALAVFF FLANWNSFVW PLTITSNPDL
RVVQVGIATF QQQYVSDWNY VLAAATVAAL PTLLMFFFFQ KQIVESIKTA GFK