Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2820 |
Symbol | |
ID | 5209789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3513819 |
End bp | 3514718 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640596419 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001277141 |
Protein GI | 148656936 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0050805 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCG ATCTGCAACA GACGACGATA GTCAGTGTGC GAACGCAGAG CGGACCGCTG TTCGGCATGC GTAATCAGCG GCTCGCACAG CGGGTGATAG TCTATGCATT GCTCCTGGCG TTATCGGTGG TATTTATTCT GCCGTTTCTG TGGATGGTCT CAACATCGCT GAAGCAGAGC GAAGATGTGT TTACCTACCC GCCCAGTTTT TTTCCGACGA CGTTTCTCTG GCAGAACTAT CCGCGCGGCT GGACTATTCT TCCTTTCAAT ACCTTCCTGA TCAATTCGCT GATTGTCACC TCCGCGAATG TGATCGGCAA CCTGATTTCC TGTTCCCTGG TGGCATTCGG GTTTGCGCGA CTGCGCGCCC GCGGGCGGGG CATTCTGTTC CTGGCGTTGC TGGCGACCCT CATGATCCCG CGTGAGGTGA CGATCGTGCC GCGCTTCCTG TTGTTCAGCC AGATGGGGTT GGTGAACACC CTCTGGCCCC TGATCCTTCC TGCATGGTTC GGGTATGCGT TCTTCATCTT TCTGCTGCGA CAGTTCTTTA TGACGATCCC GACCGAACTC GATGATGCAG CGCGTATCGA TGGCGCATCA TCGCTGCGCA TCTTCTTCGA GATCATTCTG CCGCTCTCCA AACCGGCGCT GGCGACTGTG GCAATTTTTG CGTTCATCGG GAACTGGAGC AACCTGCTCG ATCCGCTGAT CTACATTCGT TCGCAGGACC TGTACACCCT TGCACTTGGA CTGAACCTGT TCCGCGGGCA GAACTTCACC CAGTTCAACC TGCTGATGGC GGTGTCGATC ATTACGCTGA TCCCGGTTCT CACTGTCTTC TTCCTGTCAC AACGCCTCTT CGTCCAGGGT GTCACCCTGA CCGGCATGGG GGGACGATAG
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Protein sequence | MDADLQQTTI VSVRTQSGPL FGMRNQRLAQ RVIVYALLLA LSVVFILPFL WMVSTSLKQS EDVFTYPPSF FPTTFLWQNY PRGWTILPFN TFLINSLIVT SANVIGNLIS CSLVAFGFAR LRARGRGILF LALLATLMIP REVTIVPRFL LFSQMGLVNT LWPLILPAWF GYAFFIFLLR QFFMTIPTEL DDAARIDGAS SLRIFFEIIL PLSKPALATV AIFAFIGNWS NLLDPLIYIR SQDLYTLALG LNLFRGQNFT QFNLLMAVSI ITLIPVLTVF FLSQRLFVQG VTLTGMGGR
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