Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0130 |
Symbol | |
ID | 6407773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 143717 |
End bp | 144553 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710039 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001989168 |
Protein GI | 192288563 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.519096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG CACGACCCAG CCTGATCCGC TCCAGCTTCC GCCACGCCGC TCTGATGGTT GGCGCCGTGC TGATGCTGGC GCCGTTCGTC TGGATGCTGT CGACCGCGTC GAAGCCGCCG GAAGAGATCT ACTCCAGCGA CCTGCATCTG ATCCCGCATC ACTTTGCGCT GTGGGAGAAT CTCCGCATCG CGTTCGGCAA GGCCGATCTC GGCCGCTTCC TGCTCAACGG CGTGATCGTC ACGGTGGCGA TCTTCACCTG CCAGGTGCTG ATCGCGTTGC CGGCCGCCTA TGCGCTCGCC AAGCTGCGCT TCCTTGGGCG CAAGGCGCTG TTCGCGCTGG TTCTGTTCGG CATTCTGATC CCGCCGCAGG CGACCGCGAT CCCGGTGTTC CTGCTGCTGC ACCAGCTCGG GGCGCTCGAC AGCTACGCGG CGCTGGTGCT GCCGTTCACC ATCTCGGTGT TCGGCATCTT TCTGATGCGG CAGTTCTTCA TGACCGTGCC GGACGATCTG CTCGACGCCG CCCGGATGGA CGGGATGTCG GAGTTCGCCA TCGTCTGGCG GGTGATGCTG CCGACTGCGA TCCCTGCGGT CACCGCGTTC GGCATCTTCT CGGTGGTGGC GCACTGGAAC GACTACTTCT GGCCGCTGAT CGTGCTCAAC AGCCAGCAGT ACTACACCCC GCCGCTCGCG GTCGCGCATT TCCGCAATGC CGAGGCGGGC ACCAGCTACG GCCCGCTGAT GGCGGCCGCG ATCGTGATCA TCACCCCGCT CGTCGTTGCC TTCCTGCTGG CGCAGCGCCG CTTCATCGAA GGCATCACTT TGACCGGACT CAAGTAA
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Protein sequence | MSAARPSLIR SSFRHAALMV GAVLMLAPFV WMLSTASKPP EEIYSSDLHL IPHHFALWEN LRIAFGKADL GRFLLNGVIV TVAIFTCQVL IALPAAYALA KLRFLGRKAL FALVLFGILI PPQATAIPVF LLLHQLGALD SYAALVLPFT ISVFGIFLMR QFFMTVPDDL LDAARMDGMS EFAIVWRVML PTAIPAVTAF GIFSVVAHWN DYFWPLIVLN SQQYYTPPLA VAHFRNAEAG TSYGPLMAAA IVIITPLVVA FLLAQRRFIE GITLTGLK
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