| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4633 |
|---|
| Symbol | |
|---|
| ID | 4596089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4914068 |
|---|
| End bp | 4914895 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639779242 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_925815 |
|---|
| Protein GI | 119718850 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.326622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGC CCGCCCGCAG CCGGTTCCGC TCCGCGGCCG TCCTCGCCCT GGTGGTCCTG
GGCGCTGTGG TCATGCTGTT CCCGTTCCTC TGGACGGTGA TCACCTCGAT CACGCCCGGC
GGCAGCCTGG CCGACGGTCC GACGCTGTTC GTCGACAACC CCACGCTGGC GGCCTACCGG
GCGCTGCTGG ACGCGATGCC GATCTGGCGG ATCCTGGTGA ACTCGTTCGC GATCGCCGTC
GCCTCCACGG TCCTGCAGCT GGTCACCGGC TCGATGGCGG CCTACGGCTT CGCCCGCCTG
CGCTTCCCGG GCCGCAACGT GGTGTTCGCG CTCTATCTCG CGACGATGAT GGTGCCGCTG
CAGGTCCTCG TCGTCCCGCT CTTCATCGAG ATGAAGACGC TGAACCTGCA GGACACCTAC
CTGGGCCTGC TCGCCCCGTC GATCGCGTCG GCCTTCGGCG TCTTCCTGCT CAAGCAGGCG
GTCGAGACCG TGCCCCTCGA GCTGGACGAG GCGGCCACCA TCGACGGCGC CGGGCACCTG
CGGATCTTCG CCACGATCGT GCTCCCCCTG ATCCGGCCGG CACTGGCGAC GGTCGCGGTC
TTCGCGTTCA TGGCCTCGTG GAACAGCTTC CTGTGGCCCC TGGTGGTGAT CCGCTCGCCC
GAGCTGATGA CCCTGCCGCT CGGCCTGGCG ACCCTCCAGG GGCAGTTCAC CACCCGGTGG
GACGTGGTGA TGGCCGGGTC GGTGGTCTCG GTCGTCCCGA TCGCGGTCGT CTACCTGCTC
GCCCAACGCC ACGTCGTGGC CGGCATCGCG CACACCGGCA TCAAGTGA
|
|---|
| Protein sequence | MSEPARSRFR SAAVLALVVL GAVVMLFPFL WTVITSITPG GSLADGPTLF VDNPTLAAYR
ALLDAMPIWR ILVNSFAIAV ASTVLQLVTG SMAAYGFARL RFPGRNVVFA LYLATMMVPL
QVLVVPLFIE MKTLNLQDTY LGLLAPSIAS AFGVFLLKQA VETVPLELDE AATIDGAGHL
RIFATIVLPL IRPALATVAV FAFMASWNSF LWPLVVIRSP ELMTLPLGLA TLQGQFTTRW
DVVMAGSVVS VVPIAVVYLL AQRHVVAGIA HTGIK
|
|---|
| |