| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0114 |
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| Symbol | |
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| ID | 5537574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 136891 |
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| End bp | 137790 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892279 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001430268 |
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| Protein GI | 156740139 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0163331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGC AAGCAGGTCT CCAACAACGG GCAGCGATGA AGCGACACGG GCGACGCCAG
CGCGCACGCG CCTTGCAGCA GCGCTTGCTG TGGCGCATGG CGGGATACGC AGCGATCATC
GTCTCGGTGC TGGTGATCGG ACTGCCGATC TACTGGATGC TTGTTGCATC GCTCAAGACC
AGCCGCGAGA TTTATATCGT GCCGCCGACC TGGATTCCGC TCAATCCCAC GCTGGACAAC
TATCCTGACG CGTGGAGAGC AGCGCCGTTT GCGCGCTACT ACATTAATAG CATCATCGTA
ACTCTGGCGA CAACCCTCTC GAAGATGACG CTGGCGGTGC TGACGGCGTA TGCGCTCGTA
TTCCTGCGTT TTCCCGGCAA AAACATCGTC TTCCTGATCG TCCTGGCGGC GCTTATGGTG
CCAGCGCAGA TCACGATTGT GCCAAACTTT CTGACGATGG GTGATCTTGG ACTGGTCAAT
ACCTACTGGG GGCTGATCCT GCCCGGTGCG GCGACGGCGT TCGGAACTTT CCTCATGCGC
CAGTACTTTA TGACGTTGCC GCGCGAAGTA TTCGAGGCAG CCGAGATCGA CGGCGCCGGT
CACATGCGGC GTCTGTGGGA GATTGCCGTG CCGCTGGCAA TGCCCGCGCT GGTGACAACC
GGTCTCTTTG CGGTCGTCAA TGAGTGGAAC GAGTTTCTCT GGCCCCTGAT CATCACCAGC
ACGGAGGATA TGCGCACCCT GCCGATTGGT GTGGCGCGCC TGCTCGACCA GGAAGGTTTG
GCGCGCTGGG GCGTGGTGAT GGCAGGAACC ATGTTCGTTG TACTGCCGGT GGTCGTCCTT
TTTGTCTGGG CGCAACGCTA CATTGTCGAG GGGATTGCTG CCGGAGCGGT GAAAGGGTAG
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| Protein sequence | MEQQAGLQQR AAMKRHGRRQ RARALQQRLL WRMAGYAAII VSVLVIGLPI YWMLVASLKT
SREIYIVPPT WIPLNPTLDN YPDAWRAAPF ARYYINSIIV TLATTLSKMT LAVLTAYALV
FLRFPGKNIV FLIVLAALMV PAQITIVPNF LTMGDLGLVN TYWGLILPGA ATAFGTFLMR
QYFMTLPREV FEAAEIDGAG HMRRLWEIAV PLAMPALVTT GLFAVVNEWN EFLWPLIITS
TEDMRTLPIG VARLLDQEGL ARWGVVMAGT MFVVLPVVVL FVWAQRYIVE GIAAGAVKG
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