| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5330 |
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| Symbol | |
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| ID | 7380691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 332149 |
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| End bp | 332973 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648953 |
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| Product | ABC transporter |
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| Protein accession | YP_002547190 |
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| Protein GI | 222106399 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATGACCC GGTTTCGTAC CTATCTTCCG CATATCCTCC TGGCCGCTGG CGCTTTCGTC
ATGCTCTTGC CGTTCTACTG GATGGTTTTG ACCTCGATCC GTTCGCCATC GGAAATATTC
AATGTTTCCC TCTGGCCGAT CCCGGAAAAA TTCGAGGGCG TGGAAAACTA CGCAAGGGCC
GCCAGTCAGG TGCCGATGGC CCGCTTCATG CTGAATGGGG TCATCGTCTG TTTTGGCATC
CTGTTCGTCC AGGTCGTGAC CGCGGTTCCC GCAGCCTATG CTTTGGCTAA ACTTCGCTTT
CCGGGGCGAA AACTGTTGTT GACGCTGGTG ATTGCCGCGC TCTGCGTGCC GATCCAGGCG
CTGGCTCTGC CGCTGTTTGT CGGACTGGCG AAGGCGCAGC TCCTCAATAC CTATTTCGCC
ATGATGGCGC CCTTCTTCCT GTCGGTTTTC GCAATCTTCC TGTTCCACCA ATCCTTCCGC
AGCTATCCCG ATGAAATCAT CGAGGCGGCG CGGATGGATG GTTTTTCCGA GATGGAAATC
TGCTGGGGCC TGGTCTTGCG CGGCTCGTTG CCGTCGCTCG CAGCGTTTGC GGTCTTTTCG
CTGGTTGCCC ATTGGAACGA TCTCTATTGG CCGATGATCG TGATTTCCGA CACCAATCTG
GCTCCGCCGC CTCTGGGTAT GCTGTTGTTC GCGGATGTTG AATCCGGCGC GAATTACGGT
GCGCTGATGG CTGGCGCTAC ACTGATTACC GCGCCGATGG TGCTGTGCTT CCTCCTGGCA
CGGCGGCACT TCATCGCGGG TATCACCATG ACCGGCGTTA AGTGA
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| Protein sequence | MMTRFRTYLP HILLAAGAFV MLLPFYWMVL TSIRSPSEIF NVSLWPIPEK FEGVENYARA
ASQVPMARFM LNGVIVCFGI LFVQVVTAVP AAYALAKLRF PGRKLLLTLV IAALCVPIQA
LALPLFVGLA KAQLLNTYFA MMAPFFLSVF AIFLFHQSFR SYPDEIIEAA RMDGFSEMEI
CWGLVLRGSL PSLAAFAVFS LVAHWNDLYW PMIVISDTNL APPPLGMLLF ADVESGANYG
ALMAGATLIT APMVLCFLLA RRHFIAGITM TGVK
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