Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0320 |
Symbol | |
ID | 5171465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 299442 |
End bp | 301547 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640562823 |
Product | monosaccharide-transporting ATPase |
Protein accession | YP_001243925 |
Protein GI | 148269465 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAAGC TGGTCATATA CATTCTCCTC GTATTCGGTG CCGTTGTCAT GCTGGGACCT TTCATCTGGA TGCTGCTCAC CTCCTTCAAA GCACCTTCGG AGGTTCAGCA ATGGCCCCCG AGCTTCTACA CGAAGAACTT CGCTTTCTCA CGCGACGTGA AAACGATCCT GAAACCTGGT GTTCAGAGGG TCGCAAAGGG AGTCAGCCTG AGAGAAGCGT ACGCTTTGAA AACGGCCGAA AAAAATCTGC TCACCATCAC GGTGAACGAC GACCCGTTCC AAAGAGGAAC GATGGTGATC CCTCTCAAAG GGGCAAGATA CACAACGGAG GTAGATGTTG AAAAAGTCAA AGAACTCTCC TCTAAATCTC CGGTGGAATT TTCCTGGAAA ACACCAGAAG AATTCTTCGA GCAGTTCTTC ATACACTACA AGAGTGGTGC GGATCCGTAC CTTCAACGTG CAAAACTGGT GAACGAAATT CTGAGTTCAG TAGAGGGTGC TCTGCGGACC ATCTCTCAGA TGAATCGATT TGCGGACGTC AGGATAAAAG ATGAGGAGGA AAAGGAAAGA TTTCTTTCTT TTCTCGAGAC CGTGAGTGGG GAACTCTCTT CTTTCCAGGA GAAGGTGCTC AGCATGAAAT CGGGTACCAC TCTCGTTCTC TCCGACGAAG AAGTGGAGAA ACTCTATGAG CTTCTCGATG GTTTACGGCT CGAATACTCT GGAGACAATC CGCTCGTTCC TGTCTACAGA AAGAATGTGG TCTCTCCTTT CGAAGAGGTG AAGAGAAACG TCTCCTACTA CCTTGAGGTC AGCGGCTTCT TCCAGAGCGT TCAGAACCTC GCTGTGGAAA AAGACATCGT CGCCCGCTCG ATGAAAAAAG ATGAGAGAAA AGCTCTCTTT TTGAAAAAGA TCGGAAACTT CCCCGACAGA GAGCTCGTGG AAAGGCTCCT GGAGGAATCG GAAAGCCCCG TTGAGGACTA CGTCTCTTTG AAAGAGAAAG AACTCTCGGA GAAACACCAC GTGGATCTTC TTACCATCGC TTCGGCGAAG CCGGTTGTCT CTTCTCTGAT CTCTCTCGCA CAGGAAAACG GGATCGAAAC AGAAAACTTC TCTCAAATGG TCGCTGAGAT GGACATCAAA CTCGCTGAAA GTAGCACCTA CAGAGTGTTG AAGTCGAAAC TCTCCCAGCT TGGTCTGGAT GAGAAGTTCC TCACCGAAGT GGCCGGTTAT CTCAAAAGCG TTGCGCTCCT CAGAAAGGCC TACGAAGACG CGATGAGCTC CTGGAAGATT GTGGACGCTC CTGACTTTGT GAAGGAAGTC CGTGTGAAGG GTGGCGAAGT GATAGAAGTT CTTCTGGAGG GTGTCCCTTC CGTTTTCCTG AGTGATGAAC CCATCGACTC TGTGAAACTC AGGTTCTCTT TCTCCGAAGT GCTGGCTAAC ATCTTCCAGA ACTACGTTGA TGCCTGGAAC GCAGCACCCT TCCCAAGGTA CTACTTCAAC ACGTTTTTTG TGGCGACGAT AACCACTCTG CTCGAGGTGG TTACCGCATC TCTCGCCGCG TACGCCTTCT CTTGGATGGT CTTTCCCGGA AGAGACTTCA TCTTCGGTCT CTTCCTTGCG ACCATGATGA TCCCGGGAGA GGTGCTCCTC GTTCCCAACT TCATCACGAT CTCGAAACTC GGCTGGATTG ACACCTACTA CGCCCTCATA ATTCCCTGGA TCGTCAGTGT CTTCGCGATA TTCCTTCTGA GACAGCACTT TCTGACCATA CCAAGGGAAC TCTTCGATGC TGCAAAGATA GACGGATGTT CTCACTGGAG GTTTCTCTGG CAGATGGTGG TGCCTCTCAG CAGGCCTGCC GTCATCACCT CTGCACTTCT CAAATTCGTC GGAAGCTGGA ACGCGTTCCT GTGGGTCCTC ATCGTCACAA ACAGCGAAAA GTACAGAACA CTGCCCGTGG GACTCCAGGC GTTCAGTTCA GACGTGGGAA CTCAGTACAA CCTGCTCATG GCGGCCGCTA CGTTCTCGAT TCTTCCCGTG GTGATACTCT TCATCTTCAC CCAGAAGTAC TTCATCCAGG GAATCGCGAG GACCGGATTG AAATGA
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Protein sequence | MKKLVIYILL VFGAVVMLGP FIWMLLTSFK APSEVQQWPP SFYTKNFAFS RDVKTILKPG VQRVAKGVSL REAYALKTAE KNLLTITVND DPFQRGTMVI PLKGARYTTE VDVEKVKELS SKSPVEFSWK TPEEFFEQFF IHYKSGADPY LQRAKLVNEI LSSVEGALRT ISQMNRFADV RIKDEEEKER FLSFLETVSG ELSSFQEKVL SMKSGTTLVL SDEEVEKLYE LLDGLRLEYS GDNPLVPVYR KNVVSPFEEV KRNVSYYLEV SGFFQSVQNL AVEKDIVARS MKKDERKALF LKKIGNFPDR ELVERLLEES ESPVEDYVSL KEKELSEKHH VDLLTIASAK PVVSSLISLA QENGIETENF SQMVAEMDIK LAESSTYRVL KSKLSQLGLD EKFLTEVAGY LKSVALLRKA YEDAMSSWKI VDAPDFVKEV RVKGGEVIEV LLEGVPSVFL SDEPIDSVKL RFSFSEVLAN IFQNYVDAWN AAPFPRYYFN TFFVATITTL LEVVTASLAA YAFSWMVFPG RDFIFGLFLA TMMIPGEVLL VPNFITISKL GWIDTYYALI IPWIVSVFAI FLLRQHFLTI PRELFDAAKI DGCSHWRFLW QMVVPLSRPA VITSALLKFV GSWNAFLWVL IVTNSEKYRT LPVGLQAFSS DVGTQYNLLM AAATFSILPV VILFIFTQKY FIQGIARTGL K
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