44 homologs were found in PanDaTox collection
for query gene DvMF_1385 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_1385  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  100 
 
 
153 aa  313  7e-85  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2063  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.89 
 
 
155 aa  93.6  1e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.20286 
 
 
-
 
NC_009712  Mboo_0041  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.29 
 
 
152 aa  92.8  2e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.295446  normal 
 
 
-
 
NC_007498  Pcar_0166  flavin-nucleotide-binding protein  33.77 
 
 
157 aa  90.1  1e-17  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0289  pyridoxamine 5'-phosphate oxidase-related FMN- binding  31.79 
 
 
157 aa  82.8  0.000000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_1135  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25 
 
 
152 aa  82  0.000000000000003  Methanococcoides burtonii DSM 6242  Archaea  normal  0.551955  n/a   
 
 
-
 
NC_012918  GM21_1107  putative nitroimidazole resistance protein  32.17 
 
 
154 aa  72.4  0.000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009012  Cthe_0219  5-nitroimidazole antibiotic resistance protein  26.28 
 
 
157 aa  71.6  0.000000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3154  putative nitroimidazole resistance protein  32.17 
 
 
154 aa  68.9  0.00000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2615  putative nitroimidazole resistance protein  36.94 
 
 
152 aa  66.6  0.0000000001  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1617  5-nitroimidazole antibiotic resistance protein  28.1 
 
 
176 aa  67  0.0000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3868  5-nitroimidazole antibiotic resistance protein  26.45 
 
 
153 aa  63.5  0.000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1953  5-nitroimidazole antibiotic resistance protein  30.57 
 
 
163 aa  62.4  0.000000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.406915  normal  0.0305712 
 
 
-
 
NC_012793  GWCH70_1951  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.41 
 
 
182 aa  60.5  0.000000009  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000305005  n/a   
 
 
-
 
NC_011149  SeAg_B0746  putative cytoplasmic protein  29.11 
 
 
161 aa  60.1  0.00000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000242866  n/a   
 
 
-
 
NC_011094  SeSA_A0856  putative cytoplasmic protein  28.03 
 
 
167 aa  59.3  0.00000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.141086  normal 
 
 
-
 
NC_011080  SNSL254_A0759  putative 5-nitroimidazole antibiotic resistance  28.03 
 
 
161 aa  58.2  0.00000004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.279608  normal  0.302454 
 
 
-
 
NC_011205  SeD_A0807  hypothetical protein  27.39 
 
 
167 aa  58.2  0.00000004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0262203  normal 
 
 
-
 
NC_011083  SeHA_C0820  hypothetical protein  27.39 
 
 
167 aa  57.8  0.00000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.113166  normal  0.11136 
 
 
-
 
NC_010814  Glov_0087  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.7 
 
 
154 aa  56.2  0.0000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0526  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.13 
 
 
153 aa  55.1  0.0000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_3191  5-nitroimidazole antibiotic resistance protein  36.23 
 
 
77 aa  54.7  0.0000005  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013170  Ccur_06490  predicted flavin-nucleotide-binding protein  30.4 
 
 
165 aa  54.3  0.0000006  Cryptobacterium curtum DSM 15641  Bacteria  hitchhiker  0.00239792  normal  0.449333 
 
 
-
 
NC_007355  Mbar_A1549  antibiotic resistance protein  21.56 
 
 
177 aa  53.1  0.000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009718  Fnod_1620  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.74 
 
 
156 aa  52  0.000003  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0096  flavin-nucleotide-binding protein  31.03 
 
 
195 aa  51.2  0.000004  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00000283829  n/a   
 
 
-
 
NC_002967  TDE2417  nitroimidazole resistance protein, putative  21.23 
 
 
158 aa  51.6  0.000004  Treponema denticola ATCC 35405  Bacteria  normal  0.608683  n/a   
 
 
-
 
NC_013923  Nmag_3858  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  27.44 
 
 
184 aa  50.8  0.000006  Natrialba magadii ATCC 43099  Archaea  normal  0.788225  n/a   
 
 
-
 
NC_013165  Shel_20760  predicted flavin-nucleotide-binding protein  26.67 
 
 
167 aa  49.3  0.00002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1181  pyridoxamine 5'-phosphate oxidase-related FMN-binding  23.89 
 
 
158 aa  49.7  0.00002  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_2339  hypothetical protein  23.42 
 
 
168 aa  49.3  0.00002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2998  nitroimidazole resistance protein, putative  31.86 
 
 
180 aa  47  0.00009  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0350  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  22.86 
 
 
170 aa  47  0.0001  Brachyspira murdochii DSM 12563  Bacteria  normal  0.123938  n/a   
 
 
-
 
NC_002950  PG1407  nitroimidazole resistance protein, putative  29.55 
 
 
178 aa  45.8  0.0002  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.460048 
 
 
-
 
NC_009483  Gura_3517  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.53 
 
 
154 aa  45.1  0.0004  Geobacter uraniireducens Rf4  Bacteria  normal  0.0426327  n/a   
 
 
-
 
NC_007519  Dde_1104  nitroimidazole resistance protein, putative  25.69 
 
 
156 aa  43.9  0.0008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1227  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32 
 
 
160 aa  43.5  0.001  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.0424349 
 
 
-
 
NC_010814  Glov_0247  LexA DNA-binding domain protein  29.25 
 
 
233 aa  43.1  0.001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1986  putative nitroimidazole resistance protein  34.15 
 
 
171 aa  43.5  0.001  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0322  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  28.16 
 
 
159 aa  42.7  0.002  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.0000000346639  n/a   
 
 
-
 
NC_008740  Maqu_2952  hypothetical protein  23.77 
 
 
199 aa  42.7  0.002  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1739  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.38 
 
 
163 aa  42  0.003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000044515  n/a   
 
 
-
 
NC_010816  BLD_1362  flavin-nucleotide-binding protein  26.42 
 
 
199 aa  42  0.003  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_1106  pyridoxamine 5'-phosphate oxidase-related FMN-binding  22.48 
 
 
216 aa  40.4  0.009  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
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