Gene Mpal_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1227 
Symbol 
ID7271505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1260826 
End bp1261308 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content52% 
IMG OID643569864 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_002466288 
Protein GI219851856 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0424349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATA TGAGAAGGAA GGAGAGGCAG TTGACACCAG AGGAGACGGA TCGCCTTCTT 
CAGACTGGTG TATTCGGTGT CCTCTCGACG GTGGGTTCAG GGGGAGTACC CTATGGGGTC
CCTTTGCATT ATGTCTATCA CCATAAAGTG ATCTACTTTC ACTGTGCAAC AGATGGCCTG
AAGCTGGACC TCCTGGATCA GAATAACCGG GTCTCGTTCT GCGTTGTCGT CGATGCAGTC
GTTCTCCCTG AGCGATTCAG CACCCGATAT TCCAGTGTGA TTCTCTCTGG CAGGGCTTTT
GAAGTATTTG ACCTGGAGAA GCGGGCCGGC CTGGTGGCAC TTCTTGGCAA GTATTCAGCC
GGCTATCTCG ATCAGGGAAC CCGGTATATC GAGAAGGCCT GGGAGAGAAC GAAAGTCTAC
AGGATCGATA TCGAGACCTG TACCGGAAAA GGGACGATCA CCTCAAAGTC CAGTCGAGAC
TGA
 
Protein sequence
MKDMRRKERQ LTPEETDRLL QTGVFGVLST VGSGGVPYGV PLHYVYHHKV IYFHCATDGL 
KLDLLDQNNR VSFCVVVDAV VLPERFSTRY SSVILSGRAF EVFDLEKRAG LVALLGKYSA
GYLDQGTRYI EKAWERTKVY RIDIETCTGK GTITSKSSRD