| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1106 |
|---|
| Symbol | |
|---|
| ID | 5773249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1011807 |
|---|
| End bp | 1012457 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641316748 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
|---|
| Protein accession | YP_001582440 |
|---|
| Protein GI | 161528614 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3467] Predicted flavin-nucleotide-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAAATCC TAATCGATTT GAAACTAGTA GGACGCCTTG AAATCAAATC TTATGAGAAG
ATAAAGGAAT TTCTTTCTCA AGAACATGTT GGCCGTATAG CAAGCATCGA TGAGAATGGG
TATCCTCAGA TTATTCCTAT GAATTTTGTA TTTGCCAATG ATGCTATCTA CATGCATTCC
TATACTAGAG GTGAGAAATT AGACAACATA TCTAGAAATG ACAAGGTTGG ATTTGAAGTA
GACCGTGAAT TGGAGTTTCT CCCATCATAC TTTTCACATC CTACTGATGC ATCACAAGCT
GATACTTTGT ACATCAGTGT AGTTATCAAA GGAAAAGGAG TTTTTGTTGA AGATGATGAT
GAAAAAGCAT TTGGTCTTAA TGAATTGATG AAAAAATATC AGCCAGAGGG AAATTACATT
CCAATACAAA ATAATGATCT GGTACTCGAT GAAGTTGCAG TTATCAAGGT AATTCCTGTT
TCCATCAAAG GCAAATACAA AATCGGGCAA CAATTACGAT CTGATTCAAG ACAAATTCTG
GCACAAAAAA TTCTAGAAAG AAAGTCTCCC ACTTCAAAAC AAACTCTGAA AATTATGGGT
TTTGAGGAAA CTCCTGATGG CCTAAAAATG GTTGATGAAC CTGTCTGGTA G
|
|---|
| Protein sequence | MQILIDLKLV GRLEIKSYEK IKEFLSQEHV GRIASIDENG YPQIIPMNFV FANDAIYMHS
YTRGEKLDNI SRNDKVGFEV DRELEFLPSY FSHPTDASQA DTLYISVVIK GKGVFVEDDD
EKAFGLNELM KKYQPEGNYI PIQNNDLVLD EVAVIKVIPV SIKGKYKIGQ QLRSDSRQIL
AQKILERKSP TSKQTLKIMG FEETPDGLKM VDEPVW
|
|---|
| |