13 homologs were found in PanDaTox collection
for query gene Dfer_5406 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013037  Dfer_5406  hypothetical protein  100 
 
 		 269 aa  558  1e-158  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.583358 
 
 
-
 
NC_013037  Dfer_1443  transcriptional regulator, AraC family  23.27 
 
 		 246 aa  76.3  0.0000000000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.438941  normal  0.307001 
 
 
-
 
NC_013730  Slin_4136  transcriptional regulator, AraC family  25.52 
 
 		 278 aa  72.8  0.000000000006  Spirosoma linguale DSM 74  Bacteria  normal  0.322145  normal  0.588482 
 
 
-
 
NC_013132  Cpin_4858  response regulator receiver protein  21.85 
 
 		 279 aa  63.9  0.000000003  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00250208  normal  0.0726035 
 
 
-
 
NC_013132  Cpin_2143  transcriptional regulator, AraC family  20.09 
 
 		 278 aa  62.8  0.000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_5635  transcriptional regulator, AraC family  22.62 
 
 		 282 aa  58.9  0.00000008  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0154737  normal  0.936217 
 
 
-
 
NC_013132  Cpin_1518  transcriptional regulator, AraC family  24.42 
 
 		 288 aa  55.5  0.000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_2509  transcriptional regulator, AraC family  23.5 
 
 		 277 aa  54.7  0.000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_4328  transcriptional regulator, AraC family  22.45 
 
 		 310 aa  51.6  0.00001  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.11303 
 
 
-
 
NC_014230  CA2559_10188  transcription regulator  22.37 
 
 		 275 aa  52  0.00001  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_2635  transcriptional regulator, AraC family  22.87 
 
 		 285 aa  48.1  0.0002  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.82539 
 
 
-
 
NC_009441  Fjoh_4615  helix-turn-helix domain-containing protein  18.3 
 
 		 281 aa  45.1  0.001  Flavobacterium johnsoniae UW101  Bacteria  hitchhiker  0.00567057  n/a   
 
 
-
 
NC_013132  Cpin_4681  transcriptional regulator, AraC family  20.72 
 
 		 277 aa  45.4  0.001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.399866  hitchhiker  0.000374446 
 
 
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