| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5635 |
|---|
| Symbol | |
|---|
| ID | 8361812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7184900 |
|---|
| End bp | 7185748 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644967776 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003125260 |
|---|
| Protein GI | 256424607 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0154737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.936217 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGA CACTGTACAA ACCTTTCGAG ATCGACGTGA AAGAGATGGA GTCCTTTCCT
GTAAAAAAGC GGAAGATCAC TTTCTTTGAA CTGATCTATG TAGTAGCCGG TACCGGTATA
CAGTATGTAA ATGGCAATCA GTTCTCCTAC AAGAAAGGGA ATCTTTTTCT GCTGACCCCT
CAGGATAGTT ACTCATTTGA TATCAGCACA ATCACGCGGT TTTTCTTTGT CCGCTTCAAT
GAGTATTATG TGCGCGATAA GTCGCCACAT GATGCAGCAG CGATCCACTG TATTGAAAGT
ATTTTGCAGA ATGCCAGCCA CCGGCCGGGA TGTATTCTCA AAAACAAAAC AGATAAACCA
TTGATCGCCG CTTTGGTAGA AAGTATTATT GCGGAGCAGG AGCATCAGCA GATCTATTAC
GGGCGTATCA CTGCCCAGAT CGTCAATACC ATCATTACTA TCGTGGCAAG AAATATTGCG
CTTAAACTAC CTAAAAATAT CAAGGAGAAT ACAGGGGAAC TGGTGCTGGA TATGCTGCAT
TTTATACAGC AGCATATTTT TGAACCGGAG ATGCTGAGTG CAGAGAAACT GAGCGCCCAT
TTTAACATTG CGCTGAACTA CCTGGGCCGG TATTTTAAGA AACAGACAGG GGATACCTTA
CAGGATTATA TCACACATTA TAAAGTAAGG CTGATAGAAA CGAGACTTCT GCATAGTGAT
ATGCGGATCA CGGAGATTGC CCACGAACTG AGTTTTACAG ATGAAAGTCA CCTGAACCGG
ACTTTCAAGA AGATAAAAGG TATGAGCCCC AGTGCCTACA GAAAGCAATA TGCAATTCCC
TGTTATTAA
|
|---|
| Protein sequence | MKETLYKPFE IDVKEMESFP VKKRKITFFE LIYVVAGTGI QYVNGNQFSY KKGNLFLLTP
QDSYSFDIST ITRFFFVRFN EYYVRDKSPH DAAAIHCIES ILQNASHRPG CILKNKTDKP
LIAALVESII AEQEHQQIYY GRITAQIVNT IITIVARNIA LKLPKNIKEN TGELVLDMLH
FIQQHIFEPE MLSAEKLSAH FNIALNYLGR YFKKQTGDTL QDYITHYKVR LIETRLLHSD
MRITEIAHEL SFTDESHLNR TFKKIKGMSP SAYRKQYAIP CY
|
|---|
| |