Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4136 |
Symbol | |
ID | 8727895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4984373 |
End bp | 4985209 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003388922 |
Protein GI | 284038992 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.322145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.588482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCT ATATTCTCCA TACTCCCTTT AACATCTATC ACTTTGAAGC GACGACCTGG ATGCACGCCG TCCATAAGCA TACCTACTTC GAGATTATTT TTATCCTAAA GGGGCATGGC ATTCATAATA TCAACGGCAA TACGTTCGGC TACAGCGAGG GCGATGTGTT TCTGTTAGGG CCGGAGGATT ACCATGACTT TACTATTCAG GAGTCGACCG AGTTCTGCTT TATTCGCTTC CATGAATCGC TCCATGAGCA TTCGGCAGGG GATAAGGACA CCCCCTGGCA GCCAATCATA AAAACCTTGC TGACAACCTC TTCCCAGAGC CGTGGTACTA TCGTCGAGGA TAAACAGGAG AAGCAAAAAC TTCACTACCT GCTGACAGTG CTGGAAGAAG AATATAAACG GGATCAGTCG CCCTATTTTG CCATCATTCG GGACAGCCTG TTACGGAGTA TGCTCATGAT TCTGGCTCGA AATCTGTTCA GTCATTCGCT GGCCAATTCT CAGACGACCG ATTCGGTGGA AGCGATCCTG ATGTACATTC GGCAACACAT CTATCAGCCC GGAAAGCTCA CGATTGATCA TTTAGCGGAC GTATTCCATT ATGCGCCCGC TTATATTAGT CTATTTTTCA AGAAGCAGAC GGGCGAATCA CTGAAACAGT ACATCATCAA GTATAAAATC AAACTTATTG AAGCACGTTT ACTGTATAGT TCGTTGAATC TCGCCCAAAT CGCGGATGAA TTTGGCTACA CTGATGAAAG TCACCTGTGT AAGCAGTTCA GAAAGTACAC CGGTAGTACA CCCAGCGATT TCCGAAAAAG GGGCTGA
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Protein sequence | MKRYILHTPF NIYHFEATTW MHAVHKHTYF EIIFILKGHG IHNINGNTFG YSEGDVFLLG PEDYHDFTIQ ESTEFCFIRF HESLHEHSAG DKDTPWQPII KTLLTTSSQS RGTIVEDKQE KQKLHYLLTV LEEEYKRDQS PYFAIIRDSL LRSMLMILAR NLFSHSLANS QTTDSVEAIL MYIRQHIYQP GKLTIDHLAD VFHYAPAYIS LFFKKQTGES LKQYIIKYKI KLIEARLLYS SLNLAQIADE FGYTDESHLC KQFRKYTGST PSDFRKRG
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