10 homologs were found in PanDaTox collection
for query gene Dfer_1443 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013037  Dfer_1443  transcriptional regulator, AraC family  100 
 
 		 246 aa  508  1e-143  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.438941  normal  0.307001 
 
 
-
 
NC_013037  Dfer_5406  hypothetical protein  23.27 
 
 		 269 aa  76.3  0.0000000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.583358 
 
 
-
 
NC_013132  Cpin_1518  transcriptional regulator, AraC family  25.22 
 
 		 288 aa  65.1  0.000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014230  CA2559_10188  transcription regulator  22.62 
 
 		 275 aa  63.9  0.000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_4858  response regulator receiver protein  23.31 
 
 		 279 aa  56.2  0.0000004  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00250208  normal  0.0726035 
 
 
-
 
NC_013730  Slin_4136  transcriptional regulator, AraC family  22.58 
 
 		 278 aa  54.7  0.000001  Spirosoma linguale DSM 74  Bacteria  normal  0.322145  normal  0.588482 
 
 
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NC_013132  Cpin_5635  transcriptional regulator, AraC family  22.12 
 
 		 282 aa  50.4  0.00002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0154737  normal  0.936217 
 
 
-
 
NC_009441  Fjoh_4615  helix-turn-helix domain-containing protein  20.74 
 
 		 281 aa  46.6  0.0004  Flavobacterium johnsoniae UW101  Bacteria  hitchhiker  0.00567057  n/a   
 
 
-
 
NC_013132  Cpin_2635  transcriptional regulator, AraC family  20.56 
 
 		 285 aa  45.4  0.001  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.82539 
 
 
-
 
NC_011988  Avi_6122  transcriptional regulator AraC family  22.87 
 
 		 308 aa  42  0.008  Agrobacterium vitis S4  Bacteria  normal  0.335204  n/a   
 
 
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