Gene Dfer_5406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5406 
Symbol 
ID8229017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6526465 
End bp6527274 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content49% 
IMG OID644933251 
Producthypothetical protein 
Protein accessionYP_003089764 
Protein GI255039143 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.583358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCA TTCAATTCAA TGCCCACAAG AAATACCACG TGCTGCAAAG CAGAACCCGC 
GTTTGGGAAA CCCACAATGA TCTGACGCCC CATTACCGGA TCATTTTTGT CCGCACCGGA
GAGGGGCATT TCAGCCTGGA CGGGAAACTT TACGATTATG TGGAAAATGG TGTGATCTTG
CTCTCGCCCG GTCAGCACCC GATTTTTCAG GAAGACAGCA GCGCCGAGAT TTTCGTCATC
GCATTCGATA CCTGGCTTTC CGAGGATTTT TTGCAGAAAA AGGAGTTCAG CCCCGATTTT
GCCGACATTT ACAAGCAAGC CGAGCACCTG TGCGACAGCG TGCGGCTCAC GCAAGGCAAA
CCTTTGCCCA ACGAGCGCGA TGCGCAAACG ATCATTTACC TCATCAATCA GATCCTTTTT
GAAGTTACCC AGCAACCAAC CTCGCATAAC AAGCTCATTC GTGGCAGTAT AGACTTGATC
GTTACGATTC TGGCGAGAAA TAATTTTGAG ACTAAAAAAG TGGAGGAAGA GGTTGGTTCT
CAAAACCTTG CGGAATCGAT CATCGGCTAT TTGCGCGAGG AACTGCATCA GAATAAGAAC
ATCCGCGTGC CCGAACTGCT GATGCGCTTC CATATTTCGG AGGATGTCGC CAATCTGTGC
GTGCTTAACC AGACGGGCAT GTCGCTGCGG AACTTCATTT TCAAATACAA GGCCGATCTT
TTCAAAAGCC GTATGCTGAA AGTCGATATT TCCGAACTGA CGGCTTATCT CAATCCGGCG
GGTAAGCGGG AGCCGCATTT GTCGGTGTAA
 
Protein sequence
MSVIQFNAHK KYHVLQSRTR VWETHNDLTP HYRIIFVRTG EGHFSLDGKL YDYVENGVIL 
LSPGQHPIFQ EDSSAEIFVI AFDTWLSEDF LQKKEFSPDF ADIYKQAEHL CDSVRLTQGK
PLPNERDAQT IIYLINQILF EVTQQPTSHN KLIRGSIDLI VTILARNNFE TKKVEEEVGS
QNLAESIIGY LREELHQNKN IRVPELLMRF HISEDVANLC VLNQTGMSLR NFIFKYKADL
FKSRMLKVDI SELTAYLNPA GKREPHLSV