| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1518 |
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| Symbol | |
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| ID | 8357659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1863833 |
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| End bp | 1864699 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963698 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003121216 |
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| Protein GI | 256420563 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGA AAGTACTTTA CGAACCTTTT GAATTGTATG TATCAGATAT GGAGTGCTGG
GAACAGCGAC CGCTGGTCTA TCATTTCTTT GAGATCGTAC AGATACTGGA GGGAGAAGGC
GACCGTATCA CGAACATGAA TACCTTTCCG TATCACAAGG GAAGTATCTT TCTGTTTACG
CCAAGGGACT GCCGGGGCTT TGATATAAAA ACAGCCACCC GTTTCTGTTC GATCCGTTTT
TCAGAAGGCT TTCTGGGTAA ATGTAAGACA CCACAGGACA AAGCACGTAT TGCACAATGG
CTGAAACAGC TGGAACATAT CTTCTTTCAC CATAACCGTT TCCAGGAGTT ACTGGTAAAG
CAGCCGGGAG ATTGCCAGAT GATCAAGATG CTGATGGAGA ATATGGTCAG TGAATACGAA
CAGCGGCAGC CTTACCGGGA AGAAAATCTC CAACATTTCG TAACACTGCT ATTGAATATA
CTTGCCCGTA ATGTGGCTGA CAGTGCGGCT GGCGGCAACA GCGAAGAACT ATCTGAACCA
CTGATAGACA GGATCTTACT ACATATCCGG CAACATATTG CCGACCCTGA ACAATTAAGG
GTTGAGCAGC TGGCCGCTTT ATTCAATCTT TCGGAGAATT ATGTGGGTGA ATATTTCAGG
AAGTTCACAG GCGAGAGTCT GCAACATTAC ATCACACATT ACAGGATGAA ACTGGTGCAG
CAGCGACTGG CCTATAGTGC GCTTACAGTG AGCCAGATTG CGGGTGAGCT GGGATTCACA
GATGAAAGTC ATCTGAGCCG GCAGTTTAGA AAGTATAATG GGGTGAGTCC GGCGAAGTAT
AGGAAAGAAT TAGGAATTAG GAATTAA
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| Protein sequence | MEQKVLYEPF ELYVSDMECW EQRPLVYHFF EIVQILEGEG DRITNMNTFP YHKGSIFLFT
PRDCRGFDIK TATRFCSIRF SEGFLGKCKT PQDKARIAQW LKQLEHIFFH HNRFQELLVK
QPGDCQMIKM LMENMVSEYE QRQPYREENL QHFVTLLLNI LARNVADSAA GGNSEELSEP
LIDRILLHIR QHIADPEQLR VEQLAALFNL SENYVGEYFR KFTGESLQHY ITHYRMKLVQ
QRLAYSALTV SQIAGELGFT DESHLSRQFR KYNGVSPAKY RKELGIRN
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