26 homologs were found in PanDaTox collection
for query gene Bfae_17550 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_17550  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  100 
 
 
216 aa  429  1e-119  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0434357  n/a   
 
 
-
 
NC_014151  Cfla_3580  HAD-superfamily hydrolase, subfamily IA, variant 3  28.92 
 
 
212 aa  65.9  0.0000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1292  HAD family hydrolase  30.07 
 
 
207 aa  62.8  0.000000004  Salinispora tropica CNB-440  Bacteria  normal  0.212665  normal 
 
 
-
 
NC_009953  Sare_1182  HAD family hydrolase  31.93 
 
 
207 aa  58.9  0.00000005  Salinispora arenicola CNS-205  Bacteria  normal  0.142459  hitchhiker  0.00244455 
 
 
-
 
NC_011369  Rleg2_4259  HAD-superfamily hydrolase, subfamily IA, variant 3  32.33 
 
 
203 aa  54.3  0.000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0651  HAD-superfamily hydrolase, subfamily IA, variant 3  27.8 
 
 
205 aa  53.9  0.000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.286753 
 
 
-
 
NC_013093  Amir_6398  HAD-superfamily hydrolase, subfamily IA, variant 3  31.72 
 
 
291 aa  53.1  0.000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0706  HAD-superfamily hydrolase, subfamily IA, variant 3  28.21 
 
 
204 aa  53.5  0.000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.182073  normal 
 
 
-
 
NC_007951  Bxe_A0441  putative L-2-haloalkanoic acid dehalogenase (HAD aspartate-nucleophile hydrolase)  31.19 
 
 
207 aa  52.8  0.000004  Burkholderia xenovorans LB400  Bacteria  normal  0.238349  normal 
 
 
-
 
NC_009636  Smed_0542  HAD family hydrolase  32.18 
 
 
219 aa  52.8  0.000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.0173803  normal  0.811025 
 
 
-
 
NC_007510  Bcep18194_A3603  HAD family hydrolase  31.71 
 
 
207 aa  50.4  0.00002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4524  HAD-superfamily hydrolase, subfamily IA, variant 3  30.58 
 
 
203 aa  50.4  0.00002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.655556  normal  0.0295033 
 
 
-
 
NC_008542  Bcen2424_0516  HAD family hydrolase  31.71 
 
 
207 aa  49.7  0.00003  Burkholderia cenocepacia HI2424  Bacteria  normal  0.374792  n/a   
 
 
-
 
NC_008060  Bcen_2588  HAD family hydrolase  31.71 
 
 
207 aa  49.7  0.00003  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3517  HAD-superfamily hydrolase, subfamily IA, variant 3  31.22 
 
 
207 aa  49.7  0.00004  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00913759  normal  0.088603 
 
 
-
 
NC_010551  BamMC406_0446  HAD family hydrolase  31.22 
 
 
207 aa  48.5  0.00007  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.230544 
 
 
-
 
NC_010508  Bcenmc03_0488  HAD family hydrolase  31.22 
 
 
207 aa  48.5  0.00009  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_0496  HAD superfamily hydrolase  29 
 
 
205 aa  47.8  0.0001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0492  HAD superfamily hydrolase  29 
 
 
205 aa  47.8  0.0001  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0420  HAD family hydrolase  30.24 
 
 
207 aa  45.4  0.0006  Burkholderia ambifaria AMMD  Bacteria  normal  0.802184  n/a   
 
 
-
 
NC_010622  Bphy_2715  HAD family hydrolase  29.9 
 
 
207 aa  44.7  0.001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3489  HAD family hydrolase  28.35 
 
 
201 aa  43.5  0.002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0606  HAD family hydrolase  30.65 
 
 
204 aa  43.5  0.002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.49461  n/a   
 
 
-
 
NC_012880  Dd703_3957  phosphatase  28.8 
 
 
198 aa  43.5  0.002  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2325  HAD family hydrolase  27 
 
 
199 aa  42.7  0.004  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1090  hydrolase  29.65 
 
 
202 aa  42  0.006  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>