| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4259 |
|---|
| Symbol | |
|---|
| ID | 6983033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 4431768 |
|---|
| End bp | 4432379 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643398988 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
|---|
| Protein accession | YP_002283744 |
|---|
| Protein GI | 209551827 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGC TGATGGTCGA TGTCGACGGC GTGCTCATTC ATGGCCGGCC GGCCGATGGC
CTGCCGCACT TCACCTATCT TGAGCGCGAT CTCGGGCTGC GCCTCGACCT GCTGCAGCGG
GAATTCTTCC AGACCTGCTG GGCCGACATC ATCGTTGGCC GTGAGCCGTT GGAGCCCAGC
CTTGCCAAAG TGCTGGCAAA GATCGCGCCG CAGCTCAGCG CCGCGACGCT GATCGATTAC
TGGTTCGAAA ATGATTCCCG CCTCGACCGC GTTCTGCTCG ATGAGCTTGC TGCTTTCCGG
CAAAGCGGCG TCACGCTGTT CCTGGCGACC AATCAGGAGC ACAGGCGGGC GCGCTACCTG
ATGGAGCAGT TGGGTCTTAA CGCCCATTTC GACGACATCC TTTATTCCGC AGCGCTTGGA
CACCGCAAAC CGTCGCTGGA TTTTTTCCGG CTGGCGACCG AGCGGGCCGG CGTCCAGCCC
GGCGAGATCG GCTTCATCGA CGATATTGCG GAAAATATCG AAGCGGCGCG GCAGTTCGGC
TGGAACGCGG CACAATGGAC AGCGGGAGCC AGGCTCCGCG AGACGCTTTC CGCTTTCAGC
CATTCGCGAT GA
|
|---|
| Protein sequence | MKVLMVDVDG VLIHGRPADG LPHFTYLERD LGLRLDLLQR EFFQTCWADI IVGREPLEPS
LAKVLAKIAP QLSAATLIDY WFENDSRLDR VLLDELAAFR QSGVTLFLAT NQEHRRARYL
MEQLGLNAHF DDILYSAALG HRKPSLDFFR LATERAGVQP GEIGFIDDIA ENIEAARQFG
WNAAQWTAGA RLRETLSAFS HSR
|
|---|
| |