| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1182 |
|---|
| Symbol | |
|---|
| ID | 5703533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1332624 |
|---|
| End bp | 1333247 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641270700 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001536081 |
|---|
| Protein GI | 159036828 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.142459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00244455 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCGGG AACGAGCGAC GGCGCTTCTG GTGGACTTCG ACGGGGTGCT GCGCCGTTGG
GATCCGGCGG TCGCCGTCGG CGTCGAGCGA ACGTACGGGC TCACCGAGGG TGTCCTCGGC
GAGATCGCGA TGTCCTGGGG GCTGCTCCAG CCGGTACTGA CCGGCCGGGT GAGCCACGCC
GAGTGGGTGA CCAGCGTGGC CGCGGCGCTG ACCCCGTCGG TGGGGGCACA GCGAGCCCAG
GCCGCCGTGG ACGAGTGGCA GCGCTACCGG GGCGAGGTCG ACCCGCAGGT ACTGGCGTTC
ATCCGGGAGG TCCGGGCGTC CGGGGTTCCG GTCGGGCTCG GTACGAACGC CACCGACGCG
CTCGACGCCG ATCTCGCCGC CCTCGGGCTC GAGGGTGAGT TGGACGTCGT GGTGAACTCG
TCGGTCGTCG GCGTGCACAA GCCCGCGAAG GAGTACTTCC AGGCGGCCTG CGAGGCGCTA
CGAACCCCGC CGTCGCGGGT GTTGCTCGTC GACGACGATG ACCGGGTGGT CGCGGGGGCC
CGGGTGGCCG GCCTGTCGGC GCACCGGTGG AGCGGCCCCG GCGACCTGCG CTACCTGCGG
GCCGCCCTGG CCCCGGTGGG TTGA
|
|---|
| Protein sequence | MSRERATALL VDFDGVLRRW DPAVAVGVER TYGLTEGVLG EIAMSWGLLQ PVLTGRVSHA
EWVTSVAAAL TPSVGAQRAQ AAVDEWQRYR GEVDPQVLAF IREVRASGVP VGLGTNATDA
LDADLAALGL EGELDVVVNS SVVGVHKPAK EYFQAACEAL RTPPSRVLLV DDDDRVVAGA
RVAGLSAHRW SGPGDLRYLR AALAPVG
|
|---|
| |