Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4524 |
Symbol | |
ID | 8015283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 4653987 |
End bp | 4654598 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644827101 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_002978301 |
Protein GI | 241207205 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.655556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0295033 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTGC TGATGGTCGA TGTCGACGGC GTGCTCATTC ATGGTCGCCC GACCGATGGC CTGCCTCTCT TCACCTATCT CGAGCGCGAT CTCGGGCTGC GCCTCGACCT GCTGCAGCAG GAATTCTTCC AGACCCACTG GGGCGATATC ATCATCGGCC GCGCGGCGCT GGAGCCGAGG CTCGCCGGCG TTCTCGCAAA GATCGCGCCC CACCTCAGCG CTGAAACGCT GATCGACTAC TGGTTCGAAA ACGATTCCCG CCTCGATCGC AATCTGCTGG AAGAACTCGC CGCTCTCAGG CAAAGCGGCA TCACTCTCCT GCTGGCGACC AACCAGGAGC ATAGGCGGGC GCGCTACCTG ATGGAGCAGA TCGGCCTTAA CGCACATTTC GACGACATCA TTTATTCCGC AGCACTCGGG CACAGCAAAC CTTCGCCTGA CTTTTTCCGA ATGGCGACCG AGCGGGCCGG CGTGCTGCCC GGCGAAATCG CTTTCATTGA CGATATGGCG GTGAATGTCG AAGCGGCGCG GCAATTCGGC TGGAATGCCG CGCAATGGAC GGCGGGCGCG ACGCTTGGCG GCGCGTTTCC GGTCTTCGCC AGGCCGGCAT GA
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Protein sequence | MKVLMVDVDG VLIHGRPTDG LPLFTYLERD LGLRLDLLQQ EFFQTHWGDI IIGRAALEPR LAGVLAKIAP HLSAETLIDY WFENDSRLDR NLLEELAALR QSGITLLLAT NQEHRRARYL MEQIGLNAHF DDIIYSAALG HSKPSPDFFR MATERAGVLP GEIAFIDDMA VNVEAARQFG WNAAQWTAGA TLGGAFPVFA RPA
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