Gene Rleg_4524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4524 
Symbol 
ID8015283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4653987 
End bp4654598 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content62% 
IMG OID644827101 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_002978301 
Protein GI241207205 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.655556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0295033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGC TGATGGTCGA TGTCGACGGC GTGCTCATTC ATGGTCGCCC GACCGATGGC 
CTGCCTCTCT TCACCTATCT CGAGCGCGAT CTCGGGCTGC GCCTCGACCT GCTGCAGCAG
GAATTCTTCC AGACCCACTG GGGCGATATC ATCATCGGCC GCGCGGCGCT GGAGCCGAGG
CTCGCCGGCG TTCTCGCAAA GATCGCGCCC CACCTCAGCG CTGAAACGCT GATCGACTAC
TGGTTCGAAA ACGATTCCCG CCTCGATCGC AATCTGCTGG AAGAACTCGC CGCTCTCAGG
CAAAGCGGCA TCACTCTCCT GCTGGCGACC AACCAGGAGC ATAGGCGGGC GCGCTACCTG
ATGGAGCAGA TCGGCCTTAA CGCACATTTC GACGACATCA TTTATTCCGC AGCACTCGGG
CACAGCAAAC CTTCGCCTGA CTTTTTCCGA ATGGCGACCG AGCGGGCCGG CGTGCTGCCC
GGCGAAATCG CTTTCATTGA CGATATGGCG GTGAATGTCG AAGCGGCGCG GCAATTCGGC
TGGAATGCCG CGCAATGGAC GGCGGGCGCG ACGCTTGGCG GCGCGTTTCC GGTCTTCGCC
AGGCCGGCAT GA
 
Protein sequence
MKVLMVDVDG VLIHGRPTDG LPLFTYLERD LGLRLDLLQQ EFFQTHWGDI IIGRAALEPR 
LAGVLAKIAP HLSAETLIDY WFENDSRLDR NLLEELAALR QSGITLLLAT NQEHRRARYL
MEQIGLNAHF DDIIYSAALG HSKPSPDFFR MATERAGVLP GEIAFIDDMA VNVEAARQFG
WNAAQWTAGA TLGGAFPVFA RPA