| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1090 |
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| Symbol | |
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| ID | 7386171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 920141 |
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| End bp | 920749 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650575 |
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| Product | hydrolase |
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| Protein accession | YP_002548783 |
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| Protein GI | 222147826 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGAGA TCCGGCATAT CGTTTTCGAC ATCGGCAAGG TACTGATCCA TTACGACCCC
AATCTACCGT TCAGCCGGAT CATCCCGGAT GCCAAGGAGC GGCAATGGTT TTTCGACAAT
GTCTGCACCC ATGACTGGAA CATCGAACAG GACCGGGGCC GCACGTGGGC CGATGCCGAA
GCCCTGCTGA TTGCCCAATA TCCCGACCGC GAAGCGCATA TCCGCGCCTT TCGCCAACAT
TGGCGCGAAA TGGTACCGCA TGCCTATGAT GGCACGGTCG AGATCTTCAA TGGCCTGATT
AATGAGGGCC GCGATGTGAC CATGCTGACC AATTTCGCCG CCGACACGTT CACTGAAGCT
CGGGAGATGT TTCCCTTCCT CAACCGCCCG CGCGGCGTCA CAGTGTCGGG CGAAGTCGGC
CTGATCAAGC CGGATGTGGC GATTTATCAC CGCCATGCCA CGGACTTTGG TCTCGATCCG
GCCCATTCGA TTTTCATTGA TGACAGCCTG CCCAATGTGG TCGGTGCCAA GGCTGCTGGT
TGGCAGGCGG TGCATTTTGT CAGCCCGGAA AAGCTCAAGG CGGATCTCAC TAACGTCGGC
GTGCTCTGA
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| Protein sequence | MAEIRHIVFD IGKVLIHYDP NLPFSRIIPD AKERQWFFDN VCTHDWNIEQ DRGRTWADAE
ALLIAQYPDR EAHIRAFRQH WREMVPHAYD GTVEIFNGLI NEGRDVTMLT NFAADTFTEA
REMFPFLNRP RGVTVSGEVG LIKPDVAIYH RHATDFGLDP AHSIFIDDSL PNVVGAKAAG
WQAVHFVSPE KLKADLTNVG VL
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