Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2325 |
Symbol | |
ID | 4180055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 2478790 |
End bp | 2479389 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638068218 |
Product | HAD family hydrolase |
Protein accession | YP_674878 |
Protein GI | 110634670 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTGGT GTCTGATGCT GGACGTCGAC GGGGTTGTGG TCAACGGGCG CCCGGAGGAC GGTCAATCCT GGGCCACCGA TATCGAGCGC GACCTGGGCA TAGTACCCGA GAAATTGCAC GCGCTCTTCT TTGCGGCGCA TTGGGACGCC ATCGTGACAG GCAGGAAGAA CCTCGTCGAC GTGCTCGAAA CCTGCCTGCC CAAGCTTACG CATTCCGCCA CCGCGCAAGA CTTCATCAAC TACTGGTTCG AAAAAGATTC CCGTGTGGAT GAGGCCGTTT TGGCCGAATG TGATGAACTT CGTAGACGCG GCATGCGCAT CTTTCTCGCG ACCAATCAGG AGCATATGAG AGCACAGTAT CTCATGGACC GGCTTGGTCT CCGAAAGCAT GTGGACGGAA TGGTCTACTC GGCCGAGATC GCCGCGCGGA AACCTCAGCG ATCGTTCTTC GAAGCAGCAT TGAAGCGAAG CGGCTTCGCC CCTGACGACA CAATTTTAGT AGACGATACC AAGGCCAATG TAGATGCCGC GCTCGACGCG GGTTGGCAGG CAGTTCATTG GTCGGAAGGA TCAAGCCTGA TTGAACTCCT GAACCACTGA
|
Protein sequence | MKWCLMLDVD GVVVNGRPED GQSWATDIER DLGIVPEKLH ALFFAAHWDA IVTGRKNLVD VLETCLPKLT HSATAQDFIN YWFEKDSRVD EAVLAECDEL RRRGMRIFLA TNQEHMRAQY LMDRLGLRKH VDGMVYSAEI AARKPQRSFF EAALKRSGFA PDDTILVDDT KANVDAALDA GWQAVHWSEG SSLIELLNH
|
| |