16 homologs were found in PanDaTox collection
for query gene Apre_0455 on replicon NC_013171
Organism: Anaerococcus prevotii DSM 20548



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013171  Apre_0455  putative transcriptional regulator, RpiR family  100 
 
 		 211 aa  419  1e-116  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.000000000171967  n/a   
 
 
-
 
NC_010816  BLD_0894  transcriptional regulator  39.53 
 
 		 289 aa  47  0.0002  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_1993  transcriptional regulator, RpiR family  28.79 
 
 		 280 aa  47  0.0002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4022  transcriptional regulator, RpiR family  42.5 
 
 		 320 aa  44.7  0.001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0204031  n/a   
 
 
-
 
NC_013517  Sterm_3662  transcriptional regulator, RpiR family  23.74 
 
 		 251 aa  44.7  0.001  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.078396  n/a   
 
 
-
 
NC_009487  SaurJH9_0178  RpiR family transcriptional regulator  23.77 
 
 		 291 aa  43.9  0.002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2349  RpiR family transcriptional regulator  25 
 
 		 254 aa  43.5  0.002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_0183  helix-turn-helix protein RpiR  23.77 
 
 		 291 aa  43.9  0.002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2392  sugar isomerase (SIS)  25 
 
 		 254 aa  43.5  0.002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_0338  transcriptional regulator, RpiR family  36.47 
 
 		 282 aa  43.9  0.002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5684  putative transcriptional regulator, RpiR family  26.32 
 
 		 299 aa  43.5  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0287132  normal  0.474804 
 
 
-
 
NC_013171  Apre_0456  transcriptional regulator, RpiR family  26.79 
 
 		 249 aa  42.7  0.003  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.000000000284572  n/a   
 
 
-
 
NC_007777  Francci3_3036  RpiR family transcriptional regulator  23.08 
 
 		 293 aa  42.4  0.005  Frankia sp. CcI3  Bacteria  normal  1  normal  0.627986 
 
 
-
 
NC_012669  Bcav_0151  transcriptional regulator, RpiR family  42.11 
 
 		 299 aa  42  0.006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.15102  normal  1 
 
 
-
 
NC_013947  Snas_2756  transcriptional regulator, RpiR family  42.11 
 
 		 298 aa  42  0.006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.688512  normal  1 
 
 
-
 
NC_002976  SERP1910  phosphosugar-binding transcriptional regulator  25 
 
 		 253 aa  41.6  0.009  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
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